RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 MSLNQ13421 630 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 SFT2D3Q587I9 215 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 BRMS1LQ5PSV4 323 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 KLHDC10Q6PID8 442 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 CDHR3Q6ZTQ4 885 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 FAM126BQ8IXS8 530 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 DNAJC1Q96KC8 554 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.32■□□□□ 0.369e-6■■■■■ 32.4
SHKBP1-205ENST00000594973 LRFN2Q9ULH4 789 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 PCDHB5Q9Y5E4 795 aa17.32■□□□□ 0.36
SHKBP1-205ENST00000594973 HMX2A2RU54 273 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 ARHGAP42A6NI28 874 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 SPECC1L-ADORA2AF8WAN1 911 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 PEX1O43933 1283 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 FKTNO75072 461 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 AP2A1O95782 977 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 ATP5BP06576 529 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 VEGFBP49765 207 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 PSMD7P51665 324 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 BFSP2Q13515 415 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 TCTN1Q2MV58 587 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 MMEL1Q495T6 779 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 BORAQ6PGQ7 559 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 NCCRP1Q6ZVX7 275 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 CASD1Q96PB1 797 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 SRPK1Q96SB4 655 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 BRD8Q9H0E9 1235 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 RBM38Q9H0Z9 239 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 GBA3Q9H227 469 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 NDFIP2Q9NV92 336 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 MPP6Q9NZW5 540 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 GMIPQ9P107 970 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 TAGLN3Q9UI15 199 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 SYN3O14994 580 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 MTSS1O43312 755 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 RFPL1O75677 317 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 USP1O94782 785 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 CPB1P15086 417 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 CYP2C18P33260 490 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 STEAP4Q687X5 459 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 SCLYQ96I15 445 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 FUBP3Q96I24 572 aaKnown RBP eCLIP17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 MLPHQ9BV36 600 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 UNC93B1Q9H1C4 597 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 FAIMQ9NVQ4 179 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 THEGQ9P2T0 379 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 TRIM17Q9Y577 477 aa17.31■□□□□ 0.36
SHKBP1-205ENST00000594973 TBX18O95935 607 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 CLPTM1O96005 669 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 ALDH2P05091 517 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 TFAP2AP05549 437 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 SLC11A1P49279 550 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 OTOP3Q7RTS5 596 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 C14orf80Q86SX3 495 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 MON1AQ86VX9 555 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 CROCCP3Q8IVE0 287 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 FNDC8Q8TC99 324 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 SEPT5Q99719 369 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 THTPAQ9BU02 230 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 NMUR2Q9GZQ4 415 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 RMI1Q9H9A7 625 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 KCNK4Q9NYG8 393 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 TRHDEQ9UKU6 1024 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 SCML2Q9UQR0 700 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 HS3ST4Q9Y661 456 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 SHROOM3Q8TF72 1996 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 ALDH1A2O94788 518 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 POLBP06746 335 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 DHRS4L1P0CG22 281 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 ERVK-10P10266 1014 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 MYL2P10916 166 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 ETV4P43268 484 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 ITPRIPL1Q6GPH6 555 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 ZNF280DQ6N043 979 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 TTC7BQ86TV6 843 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 TMEM173Q86WV6 379 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 MARVELD2Q8N4S9 558 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 ATPAF2Q8N5M1 289 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 C8orf48Q96LL4 319 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 TEKT5Q96M29 485 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 SERPINB11Q96P15 392 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 FBXO44Q9H4M3 255 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 MARCH5Q9NX47 278 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 VANGL2Q9ULK5 521 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 PSAT1Q9Y617 370 aa17.3■□□□□ 0.36
SHKBP1-205ENST00000594973 TET1Q8NFU7 2136 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 BPTFQ12830 3046 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 TPH1P17752 444 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 GALK1P51570 392 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 APLP1P51693 650 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 ATN1P54259 1190 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 CDK18Q07002 472 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 EFEMP1Q12805 493 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 BTG3Q14201 252 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 PPP2R5DQ14738 602 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 MGAT5BQ3V5L5 792 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 CERCAMQ5T4B2 595 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 RSPO2Q6UXX9 243 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 ARHGAP12Q8IWW6 846 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 SEPT8Q92599 483 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms