RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SLC7A1P30825 629 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 ABCG1P45844 678 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 CDK9P50750 372 aaKnown RBP13.41□□□□□ -0.26
VRK3-209ENST00000594948 ATP4BP51164 291 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 INHBCP55103 352 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 LRP8Q14114 963 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 IKBKEQ14164 716 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 ARL13BQ3SXY8 428 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 XKR4Q5GH76 650 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 GLRA4Q5JXX5 417 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 TSTD2Q5T7W7 516 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 IL23RQ5VWK5 629 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 PKN3Q6P5Z2 889 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 NOTUMQ6P988 496 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 ERI1Q8IV48 349 aaKnown RBP13.41□□□□□ -0.26
VRK3-209ENST00000594948 SIX6OS1Q8N1H7 587 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 GALNT4Q8N4A0 578 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 SHCBP1Q8NEM2 672 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 TSPAN14Q8NG11 270 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 TRPM4Q8TD43 1214 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 DIS3LQ8TF46 1054 aaKnown RBP13.41□□□□□ -0.26
VRK3-209ENST00000594948 BIRC8Q96P09 236 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 PPP1R2P1Q96PQ5 205 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 APBA2Q99767 749 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 C16orf70Q9BSU1 422 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 EFHD1Q9BUP0 239 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 VTA1Q9NP79 307 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 PNPLA3Q9NST1 481 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 RBPJLQ9UBG7 517 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 XPR1Q9UBH6 696 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 G3BP2Q9UN86 482 aaKnown RBP13.41□□□□□ -0.26
VRK3-209ENST00000594948 AAR2Q9Y312 384 aaKnown RBP13.41□□□□□ -0.26
VRK3-209ENST00000594948 HES2Q9Y543 173 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 NRCAMQ92823 1304 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 HEATR9A2RTY3 570 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 H3BNH8 94 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 CXCL11O14625 94 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 PHGDHO43175 533 aaKnown RBP13.4□□□□□ -0.26
VRK3-209ENST00000594948 H6PDO95479 791 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 PGK1P00558 417 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 F9P00740 461 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 AHSGP02765 367 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 JUNP05412 331 aaKnown RBP13.4□□□□□ -0.26
VRK3-209ENST00000594948 KCNE1P15382 129 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 STMN1P16949 149 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 AXLP30530 894 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 SLC5A2P31639 672 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 CCR10P46092 362 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 CCNA1P78396 465 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 GALNT1Q10472 559 aaPredicted RBP13.4□□□□□ -0.26
VRK3-209ENST00000594948 ZBTB17Q13105 803 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 NME3Q13232 169 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 DCTN2Q13561 401 aaKnown RBP13.4□□□□□ -0.26
VRK3-209ENST00000594948 SYPL2Q5VXT5 272 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 FAM45BPQ6NSW5 357 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 TAPT1Q6NXT6 567 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 DHRS4L2Q6PKH6 230 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 SLC41A1Q8IVJ1 513 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 NUP93Q8N1F7 819 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 FAM45AQ8TCE6 357 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 ITFG2Q969R8 447 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 TMA16Q96EY4 203 aaKnown RBP13.4□□□□□ -0.26
VRK3-209ENST00000594948 PGLYRP2Q96PD5 576 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 NPAS2Q99743 824 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 ADAMTS10Q9H324 1103 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 GALNT8Q9NY28 637 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 ADA2Q9NZK5 511 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 RSL24D1Q9UHA3 163 aaKnown RBP13.4□□□□□ -0.26
VRK3-209ENST00000594948 RNF11Q9Y3C5 154 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 NUP205Q92621 2012 aa13.4□□□□□ -0.26
VRK3-209ENST00000594948 FAM95CA0A1B0GW59 222 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 ARHGEF37A1IGU5 675 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 FAM72CH0Y354 149 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 STX16-NPEPL1H3BU86 382 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 SPTLC1O15269 473 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 HUS1O60921 280 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 RECQL4O94761 1208 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 BMP10O95393 424 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 GABRB3P28472 473 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 SULT2A1Q06520 285 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 GK3PQ14409 553 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 MYBPC3Q14896 1274 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 GRIK4Q16099 956 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 MARCH8Q5T0T0 291 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 FAM72AQ5TYM5 149 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 FAM72DQ6L9T8 149 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 C8orf82Q6P1X6 216 aaPredicted RBP13.39□□□□□ -0.27
VRK3-209ENST00000594948 FAM72BQ86X60 149 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 NPWQ8N729 165 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 PACRGLQ8N7B6 248 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 ANKFN1Q8N957 763 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 ZSCAN18Q8TBC5 510 aaPredicted RBP13.39□□□□□ -0.27
VRK3-209ENST00000594948 GAB3Q8WWW8 586 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 NDRG1Q92597 394 aaKnown RBP13.39□□□□□ -0.27
VRK3-209ENST00000594948 ATP6V1E2Q96A05 226 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 PBXIP1Q96AQ6 731 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 EIF2AQ9BY44 585 aaKnown RBP13.39□□□□□ -0.27
VRK3-209ENST00000594948 PDGFDQ9GZP0 370 aaPredicted RBP13.39□□□□□ -0.27
VRK3-209ENST00000594948 MEAF6Q9HAF1 191 aa13.39□□□□□ -0.27
VRK3-209ENST00000594948 EML4Q9HC35 981 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms