RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 FNDC3AQ9Y2H6 1198 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 SLCO1B1Q9Y6L6 691 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 A0A087X0T9 212 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 H3BRJ5 948 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 PLK4O00444 970 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 GIPC1O14908 333 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 TMCC1O94876 653 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 CYP1A2P05177 515 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 FAM228BP0C875 321 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 ADRB3P13945 408 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 ARL4AP40617 200 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 ARRB1P49407 418 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 TAS2R38P59533 333 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 RHOAP61586 193 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 STAT4Q14765 748 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 PPP6R3Q5H9R7 873 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 CCDC122Q5T0U0 273 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 HORMAD1Q86X24 394 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 ARFGAP1Q8N6T3 406 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 TEKT4Q8WW24 435 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 PEBP4Q96S96 227 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 DNAJC7Q99615 494 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 CDC6Q99741 560 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 THAP2Q9H0W7 228 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 LRRC19Q9H756 370 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 ERVMER34-1Q9H9K5 563 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 GPATCH2LQ9NWQ4 482 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 ARHGAP20Q9P2F6 1191 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 UBA2Q9UBT2 640 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 ANAPC7Q9UJX3 599 aa18.03■□□□□ 0.48
SHKBP1-204ENST00000594862 SSU72P8A0A1W2PR75 194 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 A0A1W2PR77 199 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 KRIT1O00522 736 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 SUOXP51687 545 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 RPS21P63220 83 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 SIM1P81133 766 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 DPYSL2Q16555 572 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 MYLK3Q32MK0 819 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 ZNF805Q5CZA5 627 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 DBX2Q6ZNG2 339 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 VSTM4Q8IW00 320 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 KCTD15Q96SI1 283 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 ELF4Q99607 663 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 NUP85Q9BW27 656 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 TRIM7Q9C029 511 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 DEF6Q9H4E7 631 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 EBF2Q9HAK2 575 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 IL21RQ9HBE5 538 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 UVRAGQ9P2Y5 699 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 MFHAS1Q9Y4C4 1052 aa18.02■□□□□ 0.48
SHKBP1-204ENST00000594862 TP53BP1Q12888 1972 aaPredicted RBP18.02■□□□□ 0.47
SHKBP1-204ENST00000594862 A0A1W2PQU0 124 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 MYO1FO00160 1098 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 TLR4O00206 839 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 TSPAN6O43657 245 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 SH3BP5O60239 455 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 PCDH8O95206 1070 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 ERCC2P18074 760 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 MAT2AP31153 395 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 AKT2P31751 481 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 GRK6P43250 576 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 RFTN1Q14699 578 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 TRIP6Q15654 476 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 SLC18A3Q16572 532 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 CA9Q16790 459 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 TMCO4Q5TGY1 634 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 CYP4V2Q6ZWL3 525 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 GLRX5Q86SX6 157 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 DNAAF5Q86Y56 855 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 SETD7Q8WTS6 366 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 CTNNBL1Q8WYA6 563 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 FEM1CQ96JP0 617 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 PCOLCE2Q9UKZ9 415 aa18.01■□□□□ 0.47
SHKBP1-204ENST00000594862 FRYQ5TBA9 3013 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 A0A1B0GTQ1 180 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 H0Y8X5 98 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 PRAMEF11O60813 436 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 H2AFZP0C0S5 128 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 HNRNPA2B1P22626 353 aaKnown RBP18■□□□□ 0.47
SHKBP1-204ENST00000594862 SERPINB6P35237 376 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 EIF4A3P38919 411 aaKnown RBP18■□□□□ 0.47
SHKBP1-204ENST00000594862 NXPH1P58417 271 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
SHKBP1-204ENST00000594862 DPYSQ14117 519 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 HADHQ16836 314 aaKnown RBP18■□□□□ 0.47
SHKBP1-204ENST00000594862 AFMIDQ63HM1 303 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 LAYNQ6UX15 382 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 GDPD4Q6W3E5 623 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 H2AFVQ71UI9 128 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 PARS2Q7L3T8 475 aaKnown RBP18■□□□□ 0.47
SHKBP1-204ENST00000594862 CNGA4Q8IV77 575 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 HCAR2Q8TDS4 363 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 ANP32EQ9BTT0 268 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 CPEB1Q9BZB8 566 aaKnown RBP18■□□□□ 0.47
SHKBP1-204ENST00000594862 SP110Q9HB58 689 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 PDFQ9HBH1 243 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 STAU2Q9NUL3 570 aaKnown RBP eCLIP18■□□□□ 0.47
SHKBP1-204ENST00000594862 RCOR3Q9P2K3 495 aaPredicted RBP18■□□□□ 0.47
SHKBP1-204ENST00000594862 DKK3Q9UBP4 350 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 NENFQ9UMX5 172 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms