RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 KDM4CQ9H3R0 1056 aa22.25■■□□□ 1.15
HOMER3-206ENST00000594439 GOLPH3Q9H4A6 298 aa22.25■■□□□ 1.15
HOMER3-206ENST00000594439 DYRK4Q9NR20 520 aa22.25■■□□□ 1.15
HOMER3-206ENST00000594439 SUSD2Q9UGT4 822 aa22.25■■□□□ 1.15
HOMER3-206ENST00000594439 PCDH15Q96QU1 1955 aa22.25■■□□□ 1.15
HOMER3-206ENST00000594439 CEP250Q9BV73 2442 aa22.25■■□□□ 1.15
HOMER3-206ENST00000594439 ADAMTS9Q9P2N4 1935 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 LRRD1A4D1F6 860 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 C3orf70A6NLC5 250 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-206ENST00000594439 BTNL10A8MVZ5 291 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 PRR5-ARHGAP8B1AHC4 643 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 ZNF487B1APH4 448 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 KRIT1O00522 736 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 PJA2O43164 708 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 SPOPO43791 374 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 MFSD11O43934 449 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 SERPINF2P08697 491 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 ITGB7P26010 798 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 CCR5P51681 352 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 VAV2P52735 878 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 GSDMDP57764 484 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 ARHGAP8P85298 464 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 AASDHQ4L235 1098 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-206ENST00000594439 C11orf63Q6NUN7 778 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 ERN2Q76MJ5 926 aaKnown RBP22.24■■□□□ 1.15
HOMER3-206ENST00000594439 RABEPKQ7Z6M1 372 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 ZCCHC9Q8N567 271 aaKnown RBP22.24■■□□□ 1.15
HOMER3-206ENST00000594439 TPCN2Q8NHX9 752 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 SNX19Q92543 992 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 PPP1R16AQ96I34 528 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 MIR1-1HGQ9H1L0 117 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 CAPN10Q9HC96 672 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 SLC6A14Q9UN76 642 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 SLCO1B1Q9Y6L6 691 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 DUSP10Q9Y6W6 482 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 PLXNA2O75051 1894 aa22.24■■□□□ 1.15
HOMER3-206ENST00000594439 CACNA1EQ15878 2313 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 LNP1A1A4G5 178 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 INSIG1O15503 277 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 MAFKO60675 156 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 PALMO75781 387 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 PEX11BO96011 259 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 KRT1P04264 644 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 CFIP05156 583 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 RFTN1Q14699 578 aaPredicted RBP22.23■■□□□ 1.15
HOMER3-206ENST00000594439 VSIG1Q86XK7 387 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 EXOC2Q96KP1 924 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 ZNF599Q96NL3 588 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 RNF157Q96PX1 679 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 NUSAP1Q9BXS6 441 aaKnown RBP22.23■■□□□ 1.15
HOMER3-206ENST00000594439 EBF2Q9HAK2 575 aa22.23■■□□□ 1.15
HOMER3-206ENST00000594439 TBC1D3DA0A087WVF3 549 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 TBC1D3IA0A087WXS9 549 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 TBC1D3EA0A087X179 549 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 TBC1D3KA0A087X1G2 549 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 A0A1B0GTW7 788 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.22■■□□□ 1.15
HOMER3-206ENST00000594439 TBC1D3FA6NER0 549 aaPredicted RBP22.22■■□□□ 1.15
HOMER3-206ENST00000594439 TBC1D3LB9A6J9 549 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 UGT2B4P06133 528 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 TBC1D3HP0C7X1 549 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 TNNT1P13805 278 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 GNSP15586 552 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 CD27P26842 260 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 RGRP47804 291 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 NEK3P51956 506 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 PPP2CBP62714 309 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 PPP2CAP67775 309 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 RAD51Q06609 339 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 CCDC15Q0P6D6 951 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 ZNF805Q5CZA5 627 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 TMCO4Q5TGY1 634 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 TBC1D3GQ6DHY5 549 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 TBC1D3CQ6IPX1 549 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 PARS2Q7L3T8 475 aaKnown RBP22.22■■□□□ 1.15
HOMER3-206ENST00000594439 TBC1D3Q8IZP1 549 aaPredicted RBP22.22■■□□□ 1.15
HOMER3-206ENST00000594439 ATPAF2Q8N5M1 289 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 TSEN2Q8NCE0 465 aaKnown RBP22.22■■□□□ 1.15
HOMER3-206ENST00000594439 CALR3Q96L12 384 aaKnown RBP22.22■■□□□ 1.15
HOMER3-206ENST00000594439 DESI2Q9BSY9 194 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 OSBPL1AQ9BXW6 950 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 CPEB1Q9BZB8 566 aaKnown RBP22.22■■□□□ 1.15
HOMER3-206ENST00000594439 DDX56Q9NY93 547 aaKnown RBP22.22■■□□□ 1.15
HOMER3-206ENST00000594439 DOCK9Q9BZ29 2069 aa22.22■■□□□ 1.15
HOMER3-206ENST00000594439 CFAP54Q96N23 3096 aa22.21■■□□□ 1.15
HOMER3-206ENST00000594439 A0A1W2PPC4 97 aa22.21■■□□□ 1.15
HOMER3-206ENST00000594439 C16orf96A6NNT2 1141 aa22.21■■□□□ 1.15
HOMER3-206ENST00000594439 BCAT2O15382 392 aaPredicted RBP22.21■■□□□ 1.15
HOMER3-206ENST00000594439 LATO43561 262 aa22.21■■□□□ 1.15
HOMER3-206ENST00000594439 PSTPIP1O43586 416 aa22.21■■□□□ 1.15
HOMER3-206ENST00000594439 CSNK1DP48730 415 aa22.21■■□□□ 1.15
HOMER3-206ENST00000594439 SLC10A7Q0GE19 358 aa22.21■■□□□ 1.15
HOMER3-206ENST00000594439 GALNT2Q10471 571 aa22.21■■□□□ 1.15
HOMER3-206ENST00000594439 LBRQ14739 615 aaKnown RBP22.21■■□□□ 1.15
HOMER3-206ENST00000594439 RSPO4Q2I0M5 234 aaPredicted RBP22.21■■□□□ 1.15
HOMER3-206ENST00000594439 GDPD4Q6W3E5 623 aa22.21■■□□□ 1.15
HOMER3-206ENST00000594439 KIAA1328Q86T90 577 aa22.21■■□□□ 1.15
HOMER3-206ENST00000594439 LRRC49Q8IUZ0 686 aa22.21■■□□□ 1.15
HOMER3-206ENST00000594439 NETO1Q8TDF5 533 aa22.21■■□□□ 1.15
HOMER3-206ENST00000594439 RNF25Q96BH1 459 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms