RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 C3orf38Q5JPI3 329 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 DPY19L2P1Q6NXN4 242 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 ZCCHC8Q6NZY4 707 aaKnown RBP17.79■□□□□ 0.44
RETREG3-212ENST00000593251 GUSBP11Q6P575 273 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 ZNF783Q6ZMS7 281 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 ZNF605Q86T29 641 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 PARGQ86W56 976 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 LSMEM2Q8N112 164 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 RYBPQ8N488 228 aaPredicted RBP17.79■□□□□ 0.44
RETREG3-212ENST00000593251 FAM174AQ8TBP5 190 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 LMX1AQ8TE12 382 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 KCNE4Q8WWG9 221 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 ASCL3Q9NQ33 180 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 HECAQ9UBI9 543 aaPredicted RBP17.79■□□□□ 0.44
RETREG3-212ENST00000593251 SATB2Q9UPW6 733 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 FHOD1Q9Y613 1164 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 TENM4Q6N022 2769 aa17.79■□□□□ 0.44
RETREG3-212ENST00000593251 A0A1W2PNU3 283 aaPredicted RBP17.78■□□□□ 0.44
RETREG3-212ENST00000593251 H3BM21 787 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 FPGTO14772 594 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 CASC3O15234 703 aaKnown RBP17.78■□□□□ 0.44
RETREG3-212ENST00000593251 KLK10O43240 276 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 AQP9O43315 295 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 AP1G1O43747 822 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 DXOO77932 396 aaKnown RBP17.78■□□□□ 0.44
RETREG3-212ENST00000593251 CYP11B1P15538 503 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 JUNDP17535 347 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 SCNN1AP37088 669 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 RABIFP47224 123 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 TMPRSS3P57727 454 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 BPIFB4P59827 614 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 ATP11AP98196 1134 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 SLC20A2Q08357 652 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 SGCGQ13326 291 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 MAN2A1Q16706 1144 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 TPD52L1Q16890 204 aaPredicted RBP17.78■□□□□ 0.44
RETREG3-212ENST00000593251 ISXQ2M1V0 245 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 TAF1BQ53T94 588 aaPredicted RBP17.78■□□□□ 0.44
RETREG3-212ENST00000593251 BROXQ5VW32 411 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 LEKR1Q6ZMV7 388 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 EFL1Q7Z2Z2 1120 aaKnown RBP17.78■□□□□ 0.44
RETREG3-212ENST00000593251 RBFAQ8N0V3 343 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 EMC1Q8N766 993 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 ATXN7L3BQ96GX2 97 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 VCPIP1Q96JH7 1222 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 HAPLN3Q96S86 360 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.78■□□□□ 0.44
RETREG3-212ENST00000593251 C1QTNF2Q9BXJ5 285 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 TCEAL2Q9H3H9 227 aaPredicted RBP17.78■□□□□ 0.44
RETREG3-212ENST00000593251 USP29Q9HBJ7 922 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 NDFIP2Q9NV92 336 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 EVA1BQ9NVM1 165 aa17.78■□□□□ 0.44
RETREG3-212ENST00000593251 ZNF462Q96JM2 2506 aa17.77■□□□□ 0.44
RETREG3-212ENST00000593251 C16orf96A6NNT2 1141 aa17.77■□□□□ 0.44
RETREG3-212ENST00000593251 NEMP1O14524 444 aa17.77■□□□□ 0.44
RETREG3-212ENST00000593251 EIF2B5Q13144 721 aaKnown RBP17.77■□□□□ 0.44
RETREG3-212ENST00000593251 LRRC73Q5JTD7 316 aa17.77■□□□□ 0.44
RETREG3-212ENST00000593251 BNIPLQ7Z465 357 aa17.77■□□□□ 0.44
RETREG3-212ENST00000593251 NOP9Q86U38 636 aaKnown RBP17.77■□□□□ 0.44
RETREG3-212ENST00000593251 CPA5Q8WXQ8 436 aa17.77■□□□□ 0.44
RETREG3-212ENST00000593251 MAGEB5Q9BZ81 275 aa17.77■□□□□ 0.44
RETREG3-212ENST00000593251 NDST4Q9H3R1 872 aa17.77■□□□□ 0.44
RETREG3-212ENST00000593251 METTL5Q9NRN9 209 aaKnown RBP17.77■□□□□ 0.44
RETREG3-212ENST00000593251 DNAI1Q9UI46 699 aa17.77■□□□□ 0.44
RETREG3-212ENST00000593251 TMEM59LQ9UK28 342 aa17.77■□□□□ 0.44
RETREG3-212ENST00000593251 CSNK1G3Q9Y6M4 447 aa17.77■□□□□ 0.44
RETREG3-212ENST00000593251 PMS2P1A4D2B8 440 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 ERVH48-1M5A8F1 160 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 KRIT1O00522 736 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 PRKCSHP14314 528 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-212ENST00000593251 ERVPABLB-1P60509 514 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 C1orf61Q13536 156 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 CDO1Q16878 200 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 VWA3BQ502W6 1294 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 MIIPQ5JXC2 388 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 PERM1Q5SV97 790 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 ACBD5Q5T8D3 534 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-212ENST00000593251 NAA35Q5VZE5 725 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 FOXR1Q6PIV2 292 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 PHLDB2Q86SQ0 1253 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 LENG8Q96PV6 779 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-212ENST00000593251 IL12RB2Q99665 862 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 ASH1LQ9NR48 2969 aaKnown RBP17.76■□□□□ 0.43
RETREG3-212ENST00000593251 THSD1Q9NS62 852 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 PNMA8BQ9ULN7 279 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-212ENST00000593251 ENTPD2Q9Y5L3 495 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 ANKRD36A6QL64 1941 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 LRP4O75096 1905 aa17.76■□□□□ 0.43
RETREG3-212ENST00000593251 EME2A4GXA9 379 aaPredicted RBP17.75■□□□□ 0.43
RETREG3-212ENST00000593251 MUSKO15146 869 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 TSPAN6O43657 245 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 GCATO75600 419 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 UGT2B4P06133 528 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 MMEP08473 750 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 UCNP55089 124 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 PFN3P60673 137 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 NOMO3P69849 1222 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 C15orf59Q2T9L4 293 aaPredicted RBP17.75■□□□□ 0.43
RETREG3-212ENST00000593251 ZNF805Q5CZA5 627 aa17.75■□□□□ 0.43
RETREG3-212ENST00000593251 ATXN7L2Q5T6C5 722 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms