RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 ZBTB17Q13105 803 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 GLRA4Q5JXX5 417 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 ZNF618Q5T7W0 954 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 TSTD2Q5T7W7 516 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 SLC27A1Q6PCB7 646 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 CHSY3Q70JA7 882 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 KCTD13Q8WZ19 329 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 MAML3Q96JK9 1138 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 APOL2Q9BQE5 337 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 TXNRD2Q9NNW7 524 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 XPR1Q9UBH6 696 aa15.05■□□□□ -0
SMARCA4-219ENST00000592604 UBQLN1Q9UMX0 589 aaKnown RBP15.05■□□□□ -0
SMARCA4-219ENST00000592604 PAPPA2Q9BXP8 1791 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 UNCXA6NJT0 531 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 ALDH3B2P48448 385 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 TRAP1Q12931 704 aaKnown RBP15.04■□□□□ -0
SMARCA4-219ENST00000592604 IKBKEQ14164 716 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 Q3C1V9 767 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 NAPEPLDQ6IQ20 393 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 MAMDC4Q6UXC1 1216 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 CNTN4Q8IWV2 1026 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 KLHDC8BQ8IXV7 354 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 NPWQ8N729 165 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 RNF169Q8NCN4 708 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 FAM156AQ8NDB6 213 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 TSPAN14Q8NG11 270 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 GAB3Q8WWW8 586 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 TEKT5Q96M29 485 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 UNC93B1Q9H1C4 597 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 COQ10BQ9H8M1 238 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 MAGED2Q9UNF1 606 aaPredicted RBP15.04■□□□□ -0
SMARCA4-219ENST00000592604 SHROOM3Q8TF72 1996 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 CCDC166P0CW27 439 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 YBX3P16989 372 aaKnown RBP eCLIP15.04■□□□□ -05e-7■□□□□ 11.3
SMARCA4-219ENST00000592604 SAT1P21673 171 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 PGGT1BP53609 377 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 TPI1P60174 286 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 GALNT2Q10471 571 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 UGP2Q16851 508 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 CARM1Q86X55 608 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 NUP93Q8N1F7 819 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 DPF3Q92784 378 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 TNIP3Q96KP6 325 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 UHRF1Q96T88 793 aaPredicted RBP15.04■□□□□ -0
SMARCA4-219ENST00000592604 EIF2AQ9BY44 585 aaKnown RBP15.04■□□□□ -0
SMARCA4-219ENST00000592604 WDR6Q9NNW5 1121 aaKnown RBP15.04■□□□□ -0
SMARCA4-219ENST00000592604 ANLNQ9NQW6 1124 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 ADA2Q9NZK5 511 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 RBPJLQ9UBG7 517 aa15.04■□□□□ -0
SMARCA4-219ENST00000592604 POLR2AP24928 1970 aaKnown RBP15.04■□□□□ -0
SMARCA4-219ENST00000592604 TRIM24O15164 1050 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 TRPA1O75762 1119 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 H6PDO95479 791 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 CD4P01730 458 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 PTPN1P18031 435 aaKnown RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 TCN1P20061 433 aaPredicted RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 AVPR1AP37288 418 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 NDUFV1P49821 464 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 RAB10P61026 200 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 STX5Q13190 355 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 LRP8Q14114 963 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 SLC41A1Q8IVJ1 513 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 APPL2Q8NEU8 664 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 ZSCAN18Q8TBC5 510 aaPredicted RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 C16orf70Q9BSU1 422 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 HACD3Q9P035 362 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 KCNU1A8MYU2 1149 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 E7ENX8 843 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 I6L893 689 aaPredicted RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 PGK1P00558 417 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 FYNP06241 537 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 EMP3P54852 163 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 DNAJB13P59910 316 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 EN1Q05925 392 aaPredicted RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 GJC2Q5T442 439 aaPredicted RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 GK5Q6ZS86 529 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 PIWIL4Q7Z3Z4 852 aaKnown RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 LINC00523Q86TU6 105 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 NXNL1Q96CM4 212 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 ZNF560Q96MR9 790 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 NCKIPSDQ9NZQ3 722 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 A0A0G2JLL6 359 aaPredicted RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 A0A1B0GTW7 788 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 TCRBV3S1A0A5B6 114 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 TMEM233B4DJY2 109 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 PSMD3O43242 534 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 BEST1O76090 585 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 NPR3P17342 541 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 SCNN1BP51168 640 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 DCTN2Q13561 401 aaKnown RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 MAPRE2Q15555 327 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 NRF1Q16656 503 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 MARCH8Q5T0T0 291 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 HFE2Q6ZVN8 426 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 PRRT2Q7Z6L0 340 aaPredicted RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 ERI1Q8IV48 349 aaKnown RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 B3GALNT2Q8NCR0 500 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 HMGCLL1Q8TB92 370 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 SPPL2BQ8TCT7 592 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 FTHL17Q9BXU8 183 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms