RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 ZDHHC6Q9H6R6 413 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 TOR4AQ9NXH8 423 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 CA5BQ9Y2D0 317 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 FADS3Q9Y5Q0 445 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 WDFY3Q8IZQ1 3526 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 MAP1BP46821 2468 aaKnown RBP20.5■□□□□ 0.87
CIRBP-239ENST00000592467 KMT2BQ9UMN6 2715 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-239ENST00000592467 TLR4O00206 839 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 BUB1O43683 1085 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 RNF8O76064 485 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 CASP14P31944 242 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 PCK1P35558 622 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 ABL2P42684 1182 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 CCT8P50990 548 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 NEK3P51956 506 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 IL9RQ01113 521 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 FGL2Q14314 439 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 CYTH1Q15438 398 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 MYLK3Q32MK0 819 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 ATXN7L2Q5T6C5 722 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-239ENST00000592467 IQCHQ86VS3 1027 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 ARHGAP12Q8IWW6 846 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 SETD7Q8WTS6 366 aaKnown RBP20.5■□□□□ 0.87
CIRBP-239ENST00000592467 CASKIN2Q8WXE0 1202 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 KLK6Q92876 244 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 PPP1R16AQ96I34 528 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 LRIG1Q96JA1 1093 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 MRPL47Q9HD33 250 aaKnown RBP20.5■□□□□ 0.87
CIRBP-239ENST00000592467 DYRK4Q9NR20 520 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 LHX3Q9UBR4 397 aa20.5■□□□□ 0.87
CIRBP-239ENST00000592467 LUC7L2Q9Y383 392 aaKnown RBP20.5■□□□□ 0.87
CIRBP-239ENST00000592467 PTPRBP23467 1997 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 PRAMEF26H0Y7S4 382 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 EEF2KO00418 725 aaKnown RBP20.49■□□□□ 0.87
CIRBP-239ENST00000592467 AP1G1O43747 822 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 HYAL3O43820 417 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-239ENST00000592467 DFNA5O60443 496 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 DKK1O94907 266 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 CYP1A2P05177 515 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 PRLRP16471 622 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 DESP17661 470 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 NDST2P52849 883 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 SNRPD1P62314 119 aaKnown RBP20.49■□□□□ 0.87
CIRBP-239ENST00000592467 ACAP1Q15027 740 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 SETMARQ53H47 684 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-239ENST00000592467 SEL1L3Q68CR1 1132 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 RFX8Q6ZV50 586 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 RAB44Q7Z6P3 723 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-239ENST00000592467 SLCO6A1Q86UG4 719 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 NPWQ8N729 165 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 ARHGEF26Q96DR7 871 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.49■□□□□ 0.87
CIRBP-239ENST00000592467 SCNM1Q9BWG6 230 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 SLC39A8Q9C0K1 460 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 ERVMER34-1Q9H9K5 563 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 MFHAS1Q9Y4C4 1052 aa20.49■□□□□ 0.87
CIRBP-239ENST00000592467 FAM221BA6H8Z2 402 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 J3KR12 359 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 PRPSAP2O60256 369 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 POP4O95707 220 aaKnown RBP20.48■□□□□ 0.87
CIRBP-239ENST00000592467 FTH1P19P0C7X4 201 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 ERCC2P18074 760 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 RXRGP48443 463 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 HCAR3P49019 387 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 CCDC15Q0P6D6 951 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 DPYSQ14117 519 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 ZNF805Q5CZA5 627 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 TXNRD3NBQ6F5E7 133 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 KANSL1Q7Z3B3 1105 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 NIPA2Q8N8Q9 360 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 SAP25Q8TEE9 199 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 SKA1Q96BD8 255 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 CELF6Q96J87 481 aaKnown RBP20.48■□□□□ 0.87
CIRBP-239ENST00000592467 BTBD6Q96KE9 485 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 GDF3Q9NR23 364 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 CWC15Q9P013 229 aaKnown RBP20.48■□□□□ 0.87
CIRBP-239ENST00000592467 PLXNB3Q9ULL4 1909 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 EPG5Q9HCE0 2579 aa20.48■□□□□ 0.87
CIRBP-239ENST00000592467 C16orf96A6NNT2 1141 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 KRIT1O00522 736 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 SLC31A1O15431 190 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 INSIG1O15503 277 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 PRAMEF11O60813 436 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 UGT2B4P06133 528 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 PAPOLAP51003 745 aaKnown RBP20.47■□□□□ 0.87
CIRBP-239ENST00000592467 OVGP1Q12889 678 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 SUZ12Q15022 739 aaKnown RBP20.47■□□□□ 0.87
CIRBP-239ENST00000592467 DPYSL2Q16555 572 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 ASTE1Q2TB18 679 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-239ENST00000592467 ALKBH5Q6P6C2 394 aaKnown RBP20.47■□□□□ 0.87
CIRBP-239ENST00000592467 GCNT7Q6ZNI0 430 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 TP53INP2Q8IXH6 220 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 RHBDD1Q8TEB9 315 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 FZD3Q9NPG1 666 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 GGT7Q9UJ14 662 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 PCDHB9Q9Y5E1 797 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 LRRK1Q38SD2 2015 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 ARID1BQ8NFD5 2236 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-239ENST00000592467 ANKRD36A6QL64 1941 aa20.47■□□□□ 0.87
CIRBP-239ENST00000592467 AREL1O15033 823 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms