RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ATXN3LQ9H3M9 355 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 FAM96AQ9H5X1 160 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 RNPEPL1Q9HAU8 725 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 DONSONQ9NYP3 566 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 TAGLN3Q9UI15 199 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 MID2Q9UJV3 735 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 SLC12A8A0AV02 714 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 PHGDHO43175 533 aaKnown RBP15.95■□□□□ 0.14
MBD1-227ENST00000592060 GNRH1P01148 92 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 ALDH2P05091 517 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 APOA4P06727 396 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 DNAJB1P25685 340 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 RING1Q06587 406 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 SMARCB1Q12824 385 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 CTBP1Q13363 440 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 MSLNQ13421 630 aaPredicted RBP15.95■□□□□ 0.14
MBD1-227ENST00000592060 USP10Q14694 798 aaKnown RBP15.95■□□□□ 0.14
MBD1-227ENST00000592060 CNGA3Q16281 694 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 PCSK7Q16549 785 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 ZYG11AQ6WRX3 759 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 TMEM173Q86WV6 379 aaPredicted RBP15.95■□□□□ 0.14
MBD1-227ENST00000592060 CENPLQ8N0S6 344 aaPredicted RBP15.95■□□□□ 0.14
MBD1-227ENST00000592060 TEX9Q8N6V9 391 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 RANBP9Q96S59 729 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 OXCT2Q9BYC2 517 aaPredicted RBP15.95■□□□□ 0.14
MBD1-227ENST00000592060 MMADHCQ9H3L0 296 aaPredicted RBP15.95■□□□□ 0.14
MBD1-227ENST00000592060 SP110Q9HB58 689 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 NOP53Q9NZM5 478 aaKnown RBP15.95■□□□□ 0.14
MBD1-227ENST00000592060 NKX1-2Q9UD57 310 aaPredicted RBP15.95■□□□□ 0.14
MBD1-227ENST00000592060 SORCS3Q9UPU3 1222 aa15.95■□□□□ 0.14
MBD1-227ENST00000592060 PRR5-ARHGAP8B1AHC4 643 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 TRIM13O60858 407 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 H2AFYO75367 372 aaKnown RBP15.94■□□□□ 0.14
MBD1-227ENST00000592060 GALTP07902 379 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 PAMP19021 973 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 AOC1P19801 751 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 CPA2P48052 419 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 IDH3AP50213 366 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 GTF2A1P52655 376 aaPredicted RBP15.94■□□□□ 0.14
MBD1-227ENST00000592060 PGGT1BP53609 377 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 ARHGAP8P85298 464 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 SEPT6Q14141 434 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 UBAP2LQ14157 1087 aaKnown RBP15.94■□□□□ 0.14
MBD1-227ENST00000592060 DEFB115Q30KQ5 88 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 ACCSLQ4AC99 568 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 MARC1Q5VT66 337 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 NADSYN1Q6IA69 706 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 NPAS4Q8IUM7 802 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 ENDOVQ8N8Q3 282 aaKnown RBP15.94■□□□□ 0.14
MBD1-227ENST00000592060 TTC8Q8TAM2 541 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 BCL7CQ8WUZ0 217 aaPredicted RBP15.94■□□□□ 0.14
MBD1-227ENST00000592060 PSMG2Q969U7 264 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 MYEOVQ96EZ4 313 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 TMEM175Q9BSA9 504 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 FAM167BQ9BTA0 163 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 ACE2Q9BYF1 805 aaPredicted RBP15.94■□□□□ 0.14
MBD1-227ENST00000592060 VPS45Q9NRW7 570 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 OXSMQ9NWU1 459 aa15.94■□□□□ 0.14
MBD1-227ENST00000592060 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.94■□□□□ 0.14
MBD1-227ENST00000592060 FAM95CA0A1B0GW59 222 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 H7C4K7 107 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 TK2O00142 265 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 HMBSP08397 361 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 COL6A2P12110 1019 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 CD86P42081 329 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 MAXP61244 160 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 DSC2Q02487 901 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 ELAVL2Q12926 359 aaKnown RBP15.93■□□□□ 0.14
MBD1-227ENST00000592060 SLC12A1Q13621 1099 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 RAPH1Q70E73 1250 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 TAS1R1Q7RTX1 841 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 KDELC2Q7Z4H8 507 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 CIR1Q86X95 450 aaPredicted RBP15.93■□□□□ 0.14
MBD1-227ENST00000592060 CEP97Q8IW35 865 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 PGBD5Q8N414 524 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 FBXO27Q8NI29 283 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 C2orf15Q8WU43 125 aaKnown RBP15.93■□□□□ 0.14
MBD1-227ENST00000592060 KCTD4Q8WVF5 259 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 SEPT8Q92599 483 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 GATA5Q9BWX5 397 aaPredicted RBP15.93■□□□□ 0.14
MBD1-227ENST00000592060 UBE2OQ9C0C9 1292 aaKnown RBP15.93■□□□□ 0.14
MBD1-227ENST00000592060 TASP1Q9H6P5 420 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 CCSER2Q9H7U1 834 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 TLK1Q9UKI8 766 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 LRFN2Q9ULH4 789 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.93■□□□□ 0.14
MBD1-227ENST00000592060 HEATR9A2RTY3 570 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 TARM1B6A8C7 271 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 NT5C1B-RDH14C9J2C7 533 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 ANP32DO95626 131 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 ATF6P18850 670 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 AVPR1AP37288 418 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 PBX3P40426 434 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 RAB10P61026 200 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 IL10RBQ08334 325 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 TSTD2Q5T7W7 516 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 ACBD5Q5T8D3 534 aaPredicted RBP15.93■□□□□ 0.14
MBD1-227ENST00000592060 ZNF470Q6ECI4 717 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 SLC25A41Q8N5S1 370 aa15.93■□□□□ 0.14
MBD1-227ENST00000592060 ZNF781Q8N8C0 355 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms