RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 C1orf131Q8NDD1 294 aaKnown RBP16.21■□□□□ 0.19
DDX39A-216ENST00000591275 NELFBQ8WX92 580 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 CCDC3Q9BQI4 270 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 HEPHQ9BQS7 1158 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 CRACR2AQ9BSW2 395 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 BOCQ9BWV1 1114 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 C1QTNF2Q9BXJ5 285 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 ZDHHC6Q9H6R6 413 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 ARHGEF38Q9NXL2 777 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 SPASTQ9UBP0 616 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 APOBEC3BQ9UH17 382 aaKnown RBP16.21■□□□□ 0.19
DDX39A-216ENST00000591275 PNMA8BQ9ULN7 279 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-216ENST00000591275 CTNND2Q9UQB3 1225 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 ITM2BQ9Y287 266 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 FCF1Q9Y324 198 aaKnown RBP16.21■□□□□ 0.19
DDX39A-216ENST00000591275 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.21■□□□□ 0.19
DDX39A-216ENST00000591275 ATP6V1DQ9Y5K8 247 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 HEMK1Q9Y5R4 338 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-216ENST00000591275 ACTL7AQ9Y615 435 aa16.21■□□□□ 0.19
DDX39A-216ENST00000591275 CCDC187A0A096LP49 1063 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 TPP1O14773 563 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 OR1E1P30953 314 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 GKP32189 559 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 NOS2P35228 1153 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 CXCR3P49682 368 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 CCNHP51946 323 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-216ENST00000591275 STX17P56962 302 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 RNASE9P60153 205 aaKnown RBP16.2■□□□□ 0.18
DDX39A-216ENST00000591275 SLC6A3Q01959 620 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 APBA1Q02410 837 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 SLC26A9Q7LBE3 791 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 TM6SF2Q9BZW4 377 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 FAM117AQ9C073 453 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 SYNCQ9H7C4 482 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 MAN1B1Q9UKM7 699 aa16.2■□□□□ 0.18
DDX39A-216ENST00000591275 DOCK4Q8N1I0 1966 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 FAM170AA1A519 330 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 DRGXA6NNA5 263 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 NEMP1O14524 444 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 AP1G1O43747 822 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 SRGAP2O75044 1071 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 ANXA6P08133 673 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 ITGA2BP08514 1039 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 ABL2P42684 1182 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 RPIAP49247 311 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 SULT1E1P49888 294 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 SERPINH1P50454 418 aaKnown RBP16.19■□□□□ 0.18
DDX39A-216ENST00000591275 CSRP3P50461 194 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 THOP1P52888 689 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 PFN3P60673 137 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 NFKB2Q00653 900 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 C1QBPQ07021 282 aaKnown RBP16.19■□□□□ 0.18
DDX39A-216ENST00000591275 SRSF6Q13247 344 aaKnown RBP16.19■□□□□ 0.18
DDX39A-216ENST00000591275 TCEA2Q15560 299 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 TGIF1Q15583 401 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 CARD16Q5EG05 197 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 BRMS1LQ5PSV4 323 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 C6orf132Q5T0Z8 1188 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 RETSATQ6NUM9 610 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 LRRC31Q6UY01 552 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 B3GNT8Q7Z7M8 397 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 JAMLQ86YT9 394 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 PHACTR4Q8IZ21 702 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 RYBPQ8N488 228 aaPredicted RBP16.19■□□□□ 0.18
DDX39A-216ENST00000591275 PCDH20Q8N6Y1 951 aaKnown RBP16.19■□□□□ 0.18
DDX39A-216ENST00000591275 OR6K2Q8NGY2 324 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 BTN2A2Q8WVV5 523 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 GLMNQ92990 594 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 NAT6Q93015 286 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 LENG8Q96PV6 779 aaPredicted RBP16.19■□□□□ 0.18
DDX39A-216ENST00000591275 NPY6RQ99463 290 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 LRRC61Q9BV99 259 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 EPB41L5Q9HCM4 733 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 ATP13A1Q9HD20 1204 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 ATXN7L1Q9ULK2 861 aaPredicted RBP16.19■□□□□ 0.18
DDX39A-216ENST00000591275 PADI4Q9UM07 663 aa16.19■□□□□ 0.18
DDX39A-216ENST00000591275 GOLGA6L4A6NEF3 574 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 PPP1R3GB7ZBB8 358 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 LMO7DNF2Z398 122 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 RIOK3O14730 519 aaKnown RBP16.18■□□□□ 0.18
DDX39A-216ENST00000591275 PLD2O14939 933 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 ZMPSTE24O75844 475 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 CELA2BP08218 269 aaPredicted RBP16.18■□□□□ 0.18
DDX39A-216ENST00000591275 BMP6P22004 513 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 SLC5A2P31639 672 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 MLLT3P42568 568 aaPredicted RBP16.18■□□□□ 0.18
DDX39A-216ENST00000591275 ARF5P84085 180 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 DEUP1Q05D60 604 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 LINC00303Q3SY05 128 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 PTPN20Q4JDL3 420 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 TRIM65Q6PJ69 517 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 ENOSF1Q7L5Y1 443 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 VPS36Q86VN1 386 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 TBCBQ99426 244 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 CEP44Q9C0F1 390 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 CLPBQ9H078 707 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 PLCB1Q9NQ66 1216 aa16.18■□□□□ 0.18
DDX39A-216ENST00000591275 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.18■□□□□ 0.182e-7■■■□□ 15.3
DDX39A-216ENST00000591275 HECAQ9UBI9 543 aaPredicted RBP16.18■□□□□ 0.18
DDX39A-216ENST00000591275 GULP1Q9UBP9 304 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms