RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SEL1L3Q68CR1 1132 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 PHF13Q86YI8 300 aaPredicted RBP15.37■□□□□ 0.05
CIRBP-228ENST00000590347 OR5B17Q8NGF7 314 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 TFAP2BQ92481 460 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 SIGLEC10Q96LC7 697 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 ADPRHL2Q9NX46 363 aa15.37■□□□□ 0.05
CIRBP-228ENST00000590347 EVLQ9UI08 416 aaPredicted RBP15.37■□□□□ 0.05
CIRBP-228ENST00000590347 BCAS1O75363 584 aaPredicted RBP15.36■□□□□ 0.05
CIRBP-228ENST00000590347 FARP2O94887 1054 aaPredicted RBP15.36■□□□□ 0.05
CIRBP-228ENST00000590347 VNN1O95497 513 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 C8BP07358 591 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 ITGB6P18564 788 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 RAB15P59190 212 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 CATSPEREQ5SY80 951 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 ADAMTS16Q8TE57 1224 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 TRPC4APQ8TEL6 797 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 PEBP4Q96S96 227 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 PLSCR3Q9NRY6 295 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 ZNF70Q9UC06 446 aaPredicted RBP15.36■□□□□ 0.05
CIRBP-228ENST00000590347 PSME2Q9UL46 239 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 PCDHB12Q9Y5F1 795 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 FAM159BA6NKW6 160 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 HOXC11O43248 304 aaPredicted RBP15.36■□□□□ 0.05
CIRBP-228ENST00000590347 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 NAT2P11245 290 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 BMP4P12644 408 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 TGM1P22735 817 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 NPTX2P47972 431 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 HARS2P49590 506 aaKnown RBP15.36■□□□□ 0.05
CIRBP-228ENST00000590347 AP3M2P53677 418 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 C1QBPQ07021 282 aaKnown RBP15.36■□□□□ 0.05
CIRBP-228ENST00000590347 PPP1R8Q12972 351 aaKnown RBP15.36■□□□□ 0.05
CIRBP-228ENST00000590347 SPP2Q13103 211 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 PCSK7Q16549 785 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 AGAP7PQ5VUJ5 663 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 CCDC81Q6ZN84 652 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 ZNF347Q96SE7 839 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 COQ7Q99807 217 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 TOR3AQ9H497 397 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 SLC30A1Q9Y6M5 507 aa15.36■□□□□ 0.05
CIRBP-228ENST00000590347 BPTFQ12830 3046 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 ILVBLA1L0T0 632 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 APOC4-APOC2K7ER74 178 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 APOC2P02655 101 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 MTHFD1P11586 935 aaKnown RBP15.35■□□□□ 0.05
CIRBP-228ENST00000590347 PRKCAP17252 672 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 TFEBP19484 476 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 FSHRP23945 695 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 PLA2G16P53816 162 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 CPXCR1Q8N123 301 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 DCLK2Q8N568 766 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 WDTC1Q8N5D0 677 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 ANKK1Q8NFD2 765 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 ASB9Q96DX5 294 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 TCF12Q99081 682 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 EBNA1BP2Q99848 306 aaKnown RBP15.35■□□□□ 0.05
CIRBP-228ENST00000590347 GLT8D2Q9H1C3 349 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 SNX15Q9NRS6 342 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 PRR12Q9ULL5 1215 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 HEATR9A2RTY3 570 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 IDH3BO43837 385 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 MYL4P12829 197 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 MGAT1P26572 445 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 FMO4P31512 558 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 IFNA8P32881 189 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 TRPC1P48995 793 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 CDK18Q07002 472 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 CAPRIN1Q14444 709 aaKnown RBP15.35■□□□□ 0.05
CIRBP-228ENST00000590347 CYP4V2Q6ZWL3 525 aaPredicted RBP15.35■□□□□ 0.05
CIRBP-228ENST00000590347 TMEM35BQ8NCS4 154 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 NDNFQ8TB73 568 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 SCYL1Q96KG9 808 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 MUS81Q96NY9 551 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 AGAP2Q99490 1192 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 WDR11Q9BZH6 1224 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 SLC7A5P2Q9GIP4 190 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 NYAP2Q9P242 653 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 PLIN4Q96Q06 1357 aa15.35■□□□□ 0.05
CIRBP-228ENST00000590347 NRP2O60462 931 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 NADKO95544 446 aaPredicted RBP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 ATP5BP06576 529 aaKnown RBP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 ASNSP08243 561 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 HNRNPLP14866 589 aaKnown RBP eCLIP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 NCK1P16333 377 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 TSPAN8P19075 237 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 CHRM3P20309 590 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 MRPS15P82914 257 aaKnown RBP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 DENND1BQ6P3S1 775 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 TRAF7Q6Q0C0 670 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 ABRAXAS1Q6UWZ7 409 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 GALNT13Q8IUC8 556 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 SLC22A15Q8IZD6 547 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 CPSF7Q8N684 471 aaKnown RBP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 TP53I13Q8NBR0 393 aaPredicted RBP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 ZNF420Q8TAQ5 688 aaPredicted RBP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 SEPHS2Q99611 448 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 DOK1Q99704 481 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 FUNDC2Q9BWH2 189 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 ILKAPQ9H0C8 392 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms