RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 NHEJ1Q9H9Q4 299 aaPredicted RBP10.58□□□□□ -0.71
SDF2-208ENST00000589788 FBXL12Q9NXK8 326 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 ZDHHC3Q9NYG2 299 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 CTTNBP2NLQ9P2B4 639 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 NEU3Q9UQ49 428 aa10.58□□□□□ -0.71
SDF2-208ENST00000589788 ATXN2Q99700 1313 aaKnown RBP10.58□□□□□ -0.72
SDF2-208ENST00000589788 A0A1W2PP55 124 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 C1QTNF3-AMACRE9PGA6 284 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 K7ERQ8 282 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 EEF2KO00418 725 aaKnown RBP10.58□□□□□ -0.72
SDF2-208ENST00000589788 MCF2LO15068 1137 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 ALOX15BO15296 676 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 LRCH4O75427 683 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 RNASEH2AO75792 299 aaKnown RBP10.58□□□□□ -0.72
SDF2-208ENST00000589788 SEMA4FO95754 770 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 CFIP05156 583 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 C5AR1P21730 350 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 SDHBP21912 280 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 ITPKAP23677 461 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 ACSL1P33121 698 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 PCK1P35558 622 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 ACVRL1P37023 503 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 SSR1P43307 286 aaKnown RBP10.58□□□□□ -0.72
SDF2-208ENST00000589788 POU4F2Q12837 409 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 SEMA3BQ13214 749 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 BOLA3Q53S33 107 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 PPP6R3Q5H9R7 873 aaPredicted RBP10.58□□□□□ -0.72
SDF2-208ENST00000589788 FAM46CQ5VWP2 391 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 TCEAL6Q6IPX3 200 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 C22orf39Q6P5X5 142 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 ATCAYQ86WG3 371 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 SLC41A1Q8IVJ1 513 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 HDDC3Q8N4P3 179 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 ZNF564Q8TBZ8 553 aaPredicted RBP10.58□□□□□ -0.72
SDF2-208ENST00000589788 SNX19Q92543 992 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 ARHGEF2Q92974 986 aaKnown RBP10.58□□□□□ -0.72
SDF2-208ENST00000589788 TCEAL3Q969E4 200 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 ARHGEF26Q96DR7 871 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 ZNF419Q96HQ0 510 aaPredicted RBP10.58□□□□□ -0.72
SDF2-208ENST00000589788 BTBD6Q96KE9 485 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 CHP1Q99653 195 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 ACE2Q9BYF1 805 aaPredicted RBP10.58□□□□□ -0.72
SDF2-208ENST00000589788 PCED1AQ9H1Q7 454 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 ZWILCHQ9H900 591 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 SGK2Q9HBY8 427 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 NDFIP2Q9NV92 336 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 UVRAGQ9P2Y5 699 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 PILRBQ9UKJ0 227 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 NENFQ9UMX5 172 aa10.58□□□□□ -0.72
SDF2-208ENST00000589788 CHD5Q8TDI0 1954 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 CXorf51AA0A1B0GTR3 108 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.57□□□□□ -0.72
SDF2-208ENST00000589788 ZSCAN5CA6NGD5 496 aaPredicted RBP10.57□□□□□ -0.72
SDF2-208ENST00000589788 METTL12A8MUP2 240 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 WASH4PA8MWX3 477 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 PATE3B3GLJ2 98 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 SMAD6O43541 496 aaKnown RBP10.57□□□□□ -0.72
SDF2-208ENST00000589788 ZMPSTE24O75844 475 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 TMEM253P0C7T8 217 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 GNSP15586 552 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 PI4KAP42356 2102 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 ID4P47928 161 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 SERPINH1P50454 418 aaKnown RBP10.57□□□□□ -0.72
SDF2-208ENST00000589788 DNA2P51530 1060 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 ZNF135P52742 658 aaPredicted RBP10.57□□□□□ -0.72
SDF2-208ENST00000589788 YBEYP58557 167 aaPredicted RBP10.57□□□□□ -0.72
SDF2-208ENST00000589788 ARF5P84085 180 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 NUMA1Q14980 2115 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 CA9Q16790 459 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 DUOXA1Q1HG43 343 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 RSPO4Q2I0M5 234 aaPredicted RBP10.57□□□□□ -0.72
SDF2-208ENST00000589788 ASTE1Q2TB18 679 aaPredicted RBP10.57□□□□□ -0.72
SDF2-208ENST00000589788 C11orf91Q3C1V1 193 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 PARP15Q460N3 678 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 TRIM61Q5EBN2 209 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 DCAF12L1Q5VU92 463 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 DAB2IPQ5VWQ8 1189 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 PRICKLE2Q7Z3G6 844 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 LRRC8AQ8IWT6 810 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 PCDH20Q8N6Y1 951 aaKnown RBP10.57□□□□□ -0.72
SDF2-208ENST00000589788 NIPA2Q8N8Q9 360 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 CCDC112Q8NEF3 446 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 CEP76Q8TAP6 659 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 PIP4K2CQ8TBX8 421 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 NETO1Q8TDF5 533 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 HSPH1Q92598 858 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 NUSAP1Q9BXS6 441 aaKnown RBP10.57□□□□□ -0.72
SDF2-208ENST00000589788 PACSIN1Q9BY11 444 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 CEP44Q9C0F1 390 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 MIR1-1HGQ9H1L0 117 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 TNKS2Q9H2K2 1166 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 TMEM74BQ9NUR3 256 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 SPTLC3Q9NUV7 552 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 SUSD2Q9UGT4 822 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 LCMT1Q9UIC8 334 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 FZD4Q9ULV1 537 aa10.57□□□□□ -0.72
SDF2-208ENST00000589788 FAM47DPA6NHR8 397 aa10.56□□□□□ -0.72
SDF2-208ENST00000589788 LRRC72A6NJI9 287 aa10.56□□□□□ -0.72
SDF2-208ENST00000589788 RASA4BC9J798 803 aa10.56□□□□□ -0.72
SDF2-208ENST00000589788 H3BRJ5 948 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms