RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 PCDHA13Q9Y5I0 950 aa16.69■□□□□ 0.26
DNMT1-221ENST00000589538 A0A0A6YYK5 440 aaPredicted RBP16.68■□□□□ 0.26
DNMT1-221ENST00000589538 A0A1W2PPC4 97 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 TMEM110-MUSTN1A8MSY1 372 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 KRIT1O00522 736 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 ARHGAP33O14559 1287 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 IGHV4-34P06331 123 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 GJC1P36383 396 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 NOP2P46087 812 aaKnown RBP16.68■□□□□ 0.26
DNMT1-221ENST00000589538 NEK3P51956 506 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 METAP1P53582 386 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 POM121L1PQ3SYA9 428 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 LRRC38Q5VT99 294 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 LEKR1Q6ZMV7 388 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 PRPF39Q86UA1 669 aaKnown RBP16.68■□□□□ 0.26
DNMT1-221ENST00000589538 ZSCAN30Q86W11 494 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 TRIM69Q86WT6 500 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 VSIG1Q86XK7 387 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 ZCCHC9Q8N567 271 aaKnown RBP16.68■□□□□ 0.26
DNMT1-221ENST00000589538 NPWQ8N729 165 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 C1orf216Q8TAB5 229 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 RAB7BQ96AH8 199 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 ARRDC3Q96B67 414 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 SKA1Q96BD8 255 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 CALN1Q9BXU9 219 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 CPEB1Q9BZB8 566 aaKnown RBP16.68■□□□□ 0.26
DNMT1-221ENST00000589538 RXFP3Q9NSD7 469 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 IPO11Q9UI26 975 aaKnown RBP16.68■□□□□ 0.26
DNMT1-221ENST00000589538 EPN1Q9Y6I3 576 aaPredicted RBP16.68■□□□□ 0.26
DNMT1-221ENST00000589538 DMXL1Q9Y485 3027 aa16.68■□□□□ 0.26
DNMT1-221ENST00000589538 ZNF487B1APH4 448 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 C10orf142B7Z368 130 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 J3KR12 359 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 LATO43561 262 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 PALMO75781 387 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 NDUFA10O95299 355 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 GRIA4P48058 902 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 RENBPP51606 427 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 ARSEP51690 589 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 TAS2R40P59535 323 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 DPYSL3Q14195 570 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 ODF2Q5BJF6 829 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 ZNF805Q5CZA5 627 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 PIP5KL1Q5T9C9 394 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 FBXL19Q6PCT2 694 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 IL27RAQ6UWB1 636 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 BBS5Q8N3I7 341 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 NSMCE1Q8WV22 266 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 DMTF1Q9Y222 760 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 CEP250Q9BV73 2442 aa16.67■□□□□ 0.26
DNMT1-221ENST00000589538 PLK4O00444 970 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 AP1G1O43747 822 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 ADRB3P13945 408 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 IL4RP24394 825 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 CSNK1DP48730 415 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 RACK1P63244 317 aaKnown RBP16.66■□□□□ 0.26
DNMT1-221ENST00000589538 NSUN2Q08J23 767 aaKnown RBP eCLIP16.66■□□□□ 0.26
DNMT1-221ENST00000589538 CYTH1Q15438 398 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 CACNA1EQ15878 2313 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 SLC45A4Q5BKX6 768 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 ANKRD20A8PQ5CZ79 823 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 ATXN7L2Q5T6C5 722 aaPredicted RBP16.66■□□□□ 0.26
DNMT1-221ENST00000589538 GDPD4Q6W3E5 623 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 ADAT2Q7Z6V5 191 aaKnown RBP16.66■□□□□ 0.26
DNMT1-221ENST00000589538 TXLNBQ8N3L3 684 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 ATPAF2Q8N5M1 289 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 HCAR2Q8TDS4 363 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 TUBGCP5Q96RT8 1024 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 BAG1Q99933 345 aaPredicted RBP16.66■□□□□ 0.26
DNMT1-221ENST00000589538 CINPQ9BW66 212 aaPredicted RBP16.66■□□□□ 0.26
DNMT1-221ENST00000589538 TM9SF3Q9HD45 589 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 DDX56Q9NY93 547 aaKnown RBP16.66■□□□□ 0.26
DNMT1-221ENST00000589538 LHX3Q9UBR4 397 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 SEPT3Q9UH03 358 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 SPTBN4Q9H254 2564 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 PCDH15Q96QU1 1955 aa16.66■□□□□ 0.26
DNMT1-221ENST00000589538 SOWAHDA6NJG2 315 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 C4orf47A7E2U8 309 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 CDX4O14627 284 aaPredicted RBP16.65■□□□□ 0.26
DNMT1-221ENST00000589538 SPOPO43791 374 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 CER1O95813 267 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 UGT2B4P06133 528 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 CD48P09326 243 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 HSPA9P38646 679 aaKnown RBP16.65■□□□□ 0.26
DNMT1-221ENST00000589538 MAPK8P45983 427 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 TAS2R38P59533 333 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 MMRN1Q13201 1228 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 PAFAH1B3Q15102 231 aaKnown RBP16.65■□□□□ 0.26
DNMT1-221ENST00000589538 ATP13A4Q4VNC1 1196 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 SETMARQ53H47 684 aaPredicted RBP16.65■□□□□ 0.26
DNMT1-221ENST00000589538 RHOT1Q8IXI2 618 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 OR6K2Q8NGY2 324 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 FAF2Q96CS3 445 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 FEM1CQ96JP0 617 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 GTPBP2Q9BX10 602 aaKnown RBP16.65■□□□□ 0.26
DNMT1-221ENST00000589538 ETNK2Q9NVF9 386 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 HAUS2Q9NVX0 235 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 DKK3Q9UBP4 350 aa16.65■□□□□ 0.26
DNMT1-221ENST00000589538 C16orf96A6NNT2 1141 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 OPHN1O60890 802 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms