RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 NXPE3Q969Y0 559 aa11.47□□□□□ -0.57
VMP1-207ENST00000588131 TTC17Q96AE7 1141 aa11.47□□□□□ -0.57
VMP1-207ENST00000588131 TADA1Q96BN2 335 aa11.47□□□□□ -0.57
VMP1-207ENST00000588131 RPL10LQ96L21 214 aaKnown RBP11.47□□□□□ -0.57
VMP1-207ENST00000588131 MRGPRX3Q96LB0 322 aa11.47□□□□□ -0.57
VMP1-207ENST00000588131 MRGPRX2Q96LB1 330 aa11.47□□□□□ -0.57
VMP1-207ENST00000588131 SERPINB12Q96P63 405 aa11.47□□□□□ -0.57
VMP1-207ENST00000588131 APOL2Q9BQE5 337 aa11.47□□□□□ -0.57
VMP1-207ENST00000588131 WDR83Q9BRX9 315 aaKnown RBP11.47□□□□□ -0.57
VMP1-207ENST00000588131 KCNK12Q9HB15 430 aa11.47□□□□□ -0.57
VMP1-207ENST00000588131 PIH1D1Q9NWS0 290 aaKnown RBP11.47□□□□□ -0.57
VMP1-207ENST00000588131 DEC1Q9P2X7 70 aa11.47□□□□□ -0.57
VMP1-207ENST00000588131 SLC25A13Q9UJS0 675 aa11.47□□□□□ -0.57
VMP1-207ENST00000588131 AAR2Q9Y312 384 aaKnown RBP11.47□□□□□ -0.57
VMP1-207ENST00000588131 CXorf51AA0A1B0GTR3 108 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 PRRT4C9JH25 899 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 DLL1O00548 723 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 INSIG1O15503 277 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 PPFIA2O75334 1257 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 AVILO75366 819 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 PMPCBO75439 489 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 ANXA9O76027 345 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 ASGR2P07307 311 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 POLR2EP19388 210 aaKnown RBP11.46□□□□□ -0.57
VMP1-207ENST00000588131 ADRA1AP35348 466 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 HSPA9P38646 679 aaKnown RBP11.46□□□□□ -0.57
VMP1-207ENST00000588131 ARL4CP56559 192 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 RHOAP61586 193 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 ECT2LQ008S8 904 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 SULT2A1Q06520 285 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 SLC20A2Q08357 652 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 MPP3Q13368 585 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 FASTKD3Q14CZ7 662 aaKnown RBP11.46□□□□□ -0.57
VMP1-207ENST00000588131 PCSK7Q16549 785 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 HIF1AQ16665 826 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 DGKKQ5KSL6 1271 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 HP1BP3Q5SSJ5 553 aaPredicted RBP11.46□□□□□ -0.57
VMP1-207ENST00000588131 ATXN7L2Q5T6C5 722 aaPredicted RBP11.46□□□□□ -0.57
VMP1-207ENST00000588131 SH2D3CQ8N5H7 860 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 TERB1Q8NA31 727 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 ATP11CQ8NB49 1132 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 NUDCD1Q96RS6 583 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 FICDQ9BVA6 458 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 FOXP3Q9BZS1 431 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 TM6SF2Q9BZW4 377 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 CIPCQ9C0C6 399 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 TNKS2Q9H2K2 1166 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 LRRC40Q9H9A6 602 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 NOD2Q9HC29 1040 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 ARFGAP3Q9NP61 516 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 SAYSD1Q9NPB0 183 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 CASS4Q9NQ75 786 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 SLCO3A1Q9UIG8 710 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 ERVW-1Q9UQF0 538 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 HS3ST2Q9Y278 367 aa11.46□□□□□ -0.57
VMP1-207ENST00000588131 MYO18AQ92614 2054 aaKnown RBP11.46□□□□□ -0.57
VMP1-207ENST00000588131 SPTBN5Q9NRC6 3674 aaKnown RBP11.46□□□□□ -0.57
VMP1-207ENST00000588131 BRWD1Q9NSI6 2320 aa11.46□□□□□ -0.58
VMP1-207ENST00000588131 GOLGA6CA6NDK9 693 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 GOLGA6BA6NDN3 693 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 ANTXRLA6NF34 631 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 ERI2A8K979 691 aaKnown RBP11.45□□□□□ -0.58
VMP1-207ENST00000588131 E7ESA3 106 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 PSMD3O43242 534 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 AGTP01019 485 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 GOLGA6DP0CG33 693 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 MAGEA3P43357 314 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 SCNN1BP51168 640 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 PMS2P54278 862 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 WNT3AP56704 352 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 CDK16Q00536 496 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 PDIA2Q13087 525 aaKnown RBP11.45□□□□□ -0.58
VMP1-207ENST00000588131 UAP1Q16222 522 aaPredicted RBP11.45□□□□□ -0.58
VMP1-207ENST00000588131 PTPRNQ16849 979 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 BBS9Q3SYG4 887 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 C22orf39Q6P5X5 142 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 LRRC8BQ6P9F7 803 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 NCEH1Q6PIU2 408 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 PPP1R21Q6ZMI0 780 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 CENPUQ71F23 418 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 ANKMY2Q8IV38 441 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 PDIK1LQ8N165 341 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 SLC44A3Q8N4M1 653 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 MREGQ8N565 214 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 OR52K1Q8NGK4 314 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 OR6K2Q8NGY2 324 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 CSGALNACT1Q8TDX6 532 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 MYO19Q96H55 970 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 PPP1R2P1Q96PQ5 205 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 TBL1YQ9BQ87 522 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 EPB41L4BQ9H329 900 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 CDC42EP4Q9H3Q1 356 aaKnown RBP11.45□□□□□ -0.58
VMP1-207ENST00000588131 SEMA4AQ9H3S1 761 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 FBRSL1Q9HCM7 1045 aaKnown RBP11.45□□□□□ -0.58
VMP1-207ENST00000588131 SCUBE2Q9NQ36 999 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 ZNF446Q9NWS9 450 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 ELOVL2Q9NXB9 296 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 GOLGA6AQ9NYA3 693 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 NINJ2Q9NZG7 142 aa11.45□□□□□ -0.58
VMP1-207ENST00000588131 TTC34A8MYJ7 566 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms