RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 XAB2Q9HCS7 855 aaKnown RBP9.79□□□□□ -0.84
LINC01539-201ENST00000587904 EIF2B3Q9NR50 452 aaKnown RBP9.79□□□□□ -0.84
LINC01539-201ENST00000587904 KLHL3Q9UH77 587 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 PCDHB5Q9Y5E4 795 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 PLXNA3P51805 1871 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 CLUHO75153 1309 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 TCRBV7S3A2A0A539 114 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 IRAK2O43187 625 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 OCM2P0CE71 109 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 OCMP0CE72 109 aaPredicted RBP9.79□□□□□ -0.84
LINC01539-201ENST00000587904 CHRNB1P11230 501 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 CDH3P22223 829 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 FGFR3P22607 806 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 EIF4EBP2Q13542 120 aaPredicted RBP9.79□□□□□ -0.84
LINC01539-201ENST00000587904 BBS9Q3SYG4 887 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 BTBD8Q5XKL5 378 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 RWDD4Q6NW29 188 aaKnown RBP9.79□□□□□ -0.84
LINC01539-201ENST00000587904 RFWD3Q6PCD5 774 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 NET1Q7Z628 596 aaPredicted RBP9.79□□□□□ -0.84
LINC01539-201ENST00000587904 PALM2Q8IXS6 379 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 FBXO36Q8NEA4 188 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 C2orf15Q8WU43 125 aaKnown RBP9.79□□□□□ -0.84
LINC01539-201ENST00000587904 EDEM1Q92611 657 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 TOX2Q96NM4 488 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 DEFB118Q96PH6 123 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 TGS1Q96RS0 853 aaKnown RBP9.79□□□□□ -0.84
LINC01539-201ENST00000587904 BTBD10Q9BSF8 475 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 CADM1Q9BY67 442 aaKnown RBP9.79□□□□□ -0.84
LINC01539-201ENST00000587904 PSMC3IPQ9P2W1 217 aaPredicted RBP9.79□□□□□ -0.84
LINC01539-201ENST00000587904 SCML2Q9UQR0 700 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 TEX264Q9Y6I9 313 aa9.79□□□□□ -0.84
LINC01539-201ENST00000587904 H7C4K7 107 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 PQBP1O60828 265 aaKnown RBP9.78□□□□□ -0.84
LINC01539-201ENST00000587904 MLNP12872 115 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 CCL5P13501 91 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 ANPEPP15144 967 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 ERCC2P18074 760 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 PRKACBP22694 351 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 STX2P32856 288 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 ETV3P41162 512 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 RABGGTBP53611 331 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 GPX6P59796 221 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 ZNF33AQ06730 810 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 PPP2R5DQ14738 602 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 PHKG1Q16816 387 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 CTXN3Q4LDR2 81 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 MSS51Q4VC12 460 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 C1orf53Q5VUE5 145 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 MSANTD2Q6P1R3 559 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 FAM47EQ6ZV65 393 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 ITIH5Q86UX2 942 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 MON1AQ86VX9 555 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 PDSS2Q86YH6 399 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 ANKMY2Q8IV38 441 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 CRIPAKQ8N1N5 446 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 ADAM32Q8TC27 787 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 SERPINB11Q96P15 392 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 TCF12Q99081 682 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 BEGAINQ9BUH8 593 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 TKTL2Q9H0I9 626 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 HIPK3Q9H422 1215 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 GPAMQ9HCL2 828 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 COMMD8Q9NX08 183 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 NDE1Q9NXR1 346 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 ABI2Q9NYB9 513 aaPredicted RBP9.78□□□□□ -0.84
LINC01539-201ENST00000587904 AK5Q9Y6K8 562 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 MYO16Q9Y6X6 1858 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 TTC3P53804 2025 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 RNF103O00237 685 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 FGF10O15520 208 aaPredicted RBP9.78□□□□□ -0.84
LINC01539-201ENST00000587904 ESRRBO95718 433 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 CLPTM1O96005 669 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 TFAP2AP05549 437 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 APRTP07741 180 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 CCR1P32246 355 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 MAGEA3P43357 314 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 TUFMP49411 452 aaKnown RBP9.78□□□□□ -0.84
LINC01539-201ENST00000587904 PCYT1AP49585 367 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 NRLP54845 237 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 NUP107P57740 925 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 GAD2Q05329 585 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 HSPA14Q0VDF9 509 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 PDAP1Q13442 181 aaKnown RBP9.78□□□□□ -0.84
LINC01539-201ENST00000587904 FAM171A1Q5VUB5 890 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 DCDC5Q6ZRR9 648 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 CAPN12Q6ZSI9 719 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 CYP2U1Q7Z449 544 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 SCAMP5Q8TAC9 235 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 RIN3Q8TB24 985 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 SPPL2BQ8TCT7 592 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 MAML1Q92585 1016 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 BORCS5Q969J3 196 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 RNF34Q969K3 372 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 HDAC11Q96DB2 347 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 CYTH2Q99418 400 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 GPATCH1Q9BRR8 931 aaKnown RBP9.78□□□□□ -0.84
LINC01539-201ENST00000587904 TRIM55Q9BYV6 548 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 PITPNM3Q9BZ71 974 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 MAGEB5Q9BZ81 275 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 PALMDQ9NP74 551 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms