RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 ISG20Q96AZ6 181 aaKnown RBP19.11■□□□□ 0.65
TRIM47-205ENST00000587774 ERGIC2Q96RQ1 377 aa19.11■□□□□ 0.65
TRIM47-205ENST00000587774 MAGEH1Q9H213 219 aa19.11■□□□□ 0.65
TRIM47-205ENST00000587774 UCKL1Q9NWZ5 548 aa19.11■□□□□ 0.65
TRIM47-205ENST00000587774 FADS3Q9Y5Q0 445 aa19.11■□□□□ 0.65
TRIM47-205ENST00000587774 TCRBV5S1A1TA0A578 114 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 A6NNZ2 444 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 TRIM38O00635 465 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 CCP110O43303 1012 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 RAMP2O60895 175 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 HOXB3P14651 431 aaPredicted RBP19.1■□□□□ 0.65
TRIM47-205ENST00000587774 CKMT2P17540 419 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 DGKAP23743 735 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 ABL2P42684 1182 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 GEMIN4P57678 1058 aaKnown RBP19.1■□□□□ 0.65
TRIM47-205ENST00000587774 RPS21P63220 83 aaKnown RBP19.1■□□□□ 0.65
TRIM47-205ENST00000587774 MAPK8IP2Q13387 824 aaPredicted RBP19.1■□□□□ 0.65
TRIM47-205ENST00000587774 NCAPHQ15003 741 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 LEKR1Q6ZMV7 388 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 PTAR1Q7Z6K3 402 aaPredicted RBP19.1■□□□□ 0.65
TRIM47-205ENST00000587774 PYROXD2Q8N2H3 581 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 RYBPQ8N488 228 aaPredicted RBP19.1■□□□□ 0.65
TRIM47-205ENST00000587774 VOPP1Q96AW1 172 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 RETREG1Q9H6L5 497 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 KLHL11Q9NVR0 708 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 HPCAL4Q9UM19 191 aa19.1■□□□□ 0.65
TRIM47-205ENST00000587774 PTPRQQ9UMZ3 2332 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 RAD51BO15315 384 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 SIGLEC6O43699 453 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 AP1G1O43747 822 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 GSRP00390 522 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 JUPP14923 745 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 ACP1P24666 158 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 ILKQ13418 452 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 POLD3Q15054 466 aaPredicted RBP19.09■□□□□ 0.65
TRIM47-205ENST00000587774 COL28A1Q2UY09 1125 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 DNAJC24Q6P3W2 148 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 KYAT3Q6YP21 454 aaKnown RBP19.09■□□□□ 0.65
TRIM47-205ENST00000587774 SLFN11Q7Z7L1 901 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 PLPP6Q8IY26 295 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 OR2AP1Q8NGE2 309 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 NXPE2Q96DL1 559 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 BMFQ96LC9 184 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 MCEEQ96PE7 176 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 AGPAT1Q99943 283 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 SLC17A9Q9BYT1 436 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 NOL6Q9H6R4 1146 aaKnown RBP19.09■□□□□ 0.65
TRIM47-205ENST00000587774 GPR27Q9NS67 375 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 GGT7Q9UJ14 662 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 ITM2BQ9Y287 266 aa19.09■□□□□ 0.65
TRIM47-205ENST00000587774 ZFC3H1O60293 1989 aaKnown RBP19.09■□□□□ 0.65
TRIM47-205ENST00000587774 POM121BA6NF01 834 aa19.08■□□□□ 0.64
TRIM47-205ENST00000587774 SIGLEC16A6NMB1 481 aa19.08■□□□□ 0.64
TRIM47-205ENST00000587774 KRIT1O00522 736 aa19.08■□□□□ 0.64
TRIM47-205ENST00000587774 FFAR2O15552 330 aa19.08■□□□□ 0.64
TRIM47-205ENST00000587774 SPINT1O43278 529 aa19.08■□□□□ 0.64
TRIM47-205ENST00000587774 PIAS2O75928 621 aa19.08■□□□□ 0.64
TRIM47-205ENST00000587774 PAK4O96013 591 aaPredicted RBP19.08■□□□□ 0.64
TRIM47-205ENST00000587774 ATP1A3P13637 1013 aa19.08■□□□□ 0.64
TRIM47-205ENST00000587774 CDK11BP21127 795 aaKnown RBP19.08■□□□□ 0.64
TRIM47-205ENST00000587774 SNRPD1P62314 119 aaKnown RBP19.08■□□□□ 0.64
TRIM47-205ENST00000587774 RPL7AP62424 266 aaKnown RBP19.08■□□□□ 0.64
TRIM47-205ENST00000587774 C1QBPQ07021 282 aaKnown RBP19.08■□□□□ 0.64
TRIM47-205ENST00000587774 TARDBPQ13148 414 aaKnown RBP eCLIP19.08■□□□□ 0.64
TRIM47-205ENST00000587774 ZNF211Q13398 564 aaPredicted RBP19.08■□□□□ 0.64
TRIM47-205ENST00000587774 EFHC2Q5JST6 749 aa19.08■□□□□ 0.64
TRIM47-205ENST00000587774 Q6ZSR6 202 aa19.08■□□□□ 0.64
TRIM47-205ENST00000587774 RTL3Q8N8U3 475 aaKnown RBP19.08■□□□□ 0.64
TRIM47-205ENST00000587774 OR4C6Q8NH72 309 aa19.08■□□□□ 0.64
TRIM47-205ENST00000587774 ARHGEF17Q96PE2 2063 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-205ENST00000587774 LRRC10BA6NIK2 292 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 C16orf96A6NNT2 1141 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 KDELR3O43731 214 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 TMCC1O94876 653 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 UGT2B4P06133 528 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 GIMD1P0DJR0 217 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 EPHB2P29323 1055 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 ZNF143P52747 638 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-205ENST00000587774 ZNF805Q5CZA5 627 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 PPP1R15BQ5SWA1 713 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 ATXN7L2Q5T6C5 722 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-205ENST00000587774 SCYL2Q6P3W7 929 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 ZNF354CQ86Y25 554 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 AOPEPQ8N6M6 819 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 FAM174AQ8TBP5 190 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 HNRNPLLQ8WVV9 542 aaKnown RBP19.07■□□□□ 0.64
TRIM47-205ENST00000587774 BAP1Q92560 729 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 RAB7BQ96AH8 199 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 LRIG1Q96JA1 1093 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 FEM1CQ96JP0 617 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 SCUBE2Q9NQ36 999 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 HS3ST3A1Q9Y663 406 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 ATMQ13315 3056 aa19.07■□□□□ 0.64
TRIM47-205ENST00000587774 GOLGA6L22H0YM25 854 aa19.06■□□□□ 0.64
TRIM47-205ENST00000587774 DAB2P98082 770 aa19.06■□□□□ 0.64
TRIM47-205ENST00000587774 INSM1Q01101 510 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-205ENST00000587774 ZNF542PQ5EBM4 170 aa19.06■□□□□ 0.64
TRIM47-205ENST00000587774 LRRC73Q5JTD7 316 aa19.06■□□□□ 0.64
TRIM47-205ENST00000587774 CCDC183Q5T5S1 534 aa19.06■□□□□ 0.64
TRIM47-205ENST00000587774 KDM7AQ6ZMT4 941 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms