RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 CCDC81Q6ZN84 652 aa14.4□□□□□ -0.1
CXXC1-208ENST00000587170 SLC35F3Q8IY50 421 aa14.4□□□□□ -0.1
CXXC1-208ENST00000587170 PCDH20Q8N6Y1 951 aaKnown RBP14.4□□□□□ -0.1
CXXC1-208ENST00000587170 BTN2A2Q8WVV5 523 aa14.4□□□□□ -0.1
CXXC1-208ENST00000587170 SHC3Q92529 594 aa14.4□□□□□ -0.1
CXXC1-208ENST00000587170 VOPP1Q96AW1 172 aa14.4□□□□□ -0.1
CXXC1-208ENST00000587170 FEM1CQ96JP0 617 aa14.4□□□□□ -0.1
CXXC1-208ENST00000587170 FAM81BQ96LP2 452 aa14.4□□□□□ -0.1
CXXC1-208ENST00000587170 C1orf74Q96LT6 269 aa14.4□□□□□ -0.1
CXXC1-208ENST00000587170 TNKS2Q9H2K2 1166 aa14.4□□□□□ -0.1
CXXC1-208ENST00000587170 GDPD2Q9HCC8 539 aa14.4□□□□□ -0.1
CXXC1-208ENST00000587170 UBE2TQ9NPD8 197 aaPredicted RBP14.4□□□□□ -0.1
CXXC1-208ENST00000587170 TMEM51Q9NW97 253 aa14.4□□□□□ -0.1
CXXC1-208ENST00000587170 PCDHGA7Q9Y5G6 932 aa14.4□□□□□ -0.1
CXXC1-208ENST00000587170 UTP20O75691 2785 aaKnown RBP14.39□□□□□ -0.11
CXXC1-208ENST00000587170 BICDL2A1A5D9 508 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 ILVBLA1L0T0 632 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 CPED1A4D0V7 1026 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 LMO7DNF2Z398 122 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 M0QYT0 321 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 NTN3O00634 580 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-208ENST00000587170 FPGTO14772 594 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 TSPAN6O43657 245 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 PAK4O96013 591 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-208ENST00000587170 ERBB2P04626 1255 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 BMP6P22004 513 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 RECQLP46063 649 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-208ENST00000587170 CSRP3P50461 194 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 SLC6A3Q01959 620 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 SLC20A2Q08357 652 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 MAPK8IP2Q13387 824 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-208ENST00000587170 PDE1CQ14123 709 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-208ENST00000587170 PTPN20Q4JDL3 420 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 TRIM65Q6PJ69 517 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 PLPP6Q8IY26 295 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 ELOA2Q8IYF1 753 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-208ENST00000587170 RAB7BQ96AH8 199 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 IL12RB2Q99665 862 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 LRRC61Q9BV99 259 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 TKTL2Q9H0I9 626 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 SIK2Q9H0K1 926 aa14.39□□□□□ -0.11
CXXC1-208ENST00000587170 PNMA8BQ9ULN7 279 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-208ENST00000587170 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.39□□□□□ -0.11
CXXC1-208ENST00000587170 PPP1R3GB7ZBB8 358 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 PYCARD-AS1I3L0S3 204 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 GCATO75600 419 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 TFE3P19532 575 aaPredicted RBP14.38□□□□□ -0.11
CXXC1-208ENST00000587170 RPIAP49247 311 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 CCNHP51946 323 aaPredicted RBP14.38□□□□□ -0.11
CXXC1-208ENST00000587170 ARF5P84085 180 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 DRAP1Q14919 205 aaPredicted RBP14.38□□□□□ -0.11
CXXC1-208ENST00000587170 RETSATQ6NUM9 610 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 XKR5Q6UX68 686 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 BNIPLQ7Z465 357 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 TFAP2DQ7Z6R9 452 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 ZDHHC17Q8IUH5 632 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 RBFAQ8N0V3 343 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 C1orf131Q8NDD1 294 aaKnown RBP14.38□□□□□ -0.11
CXXC1-208ENST00000587170 OR7D4Q8NG98 312 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 LMX1AQ8TE12 382 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 NELFBQ8WX92 580 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 GLMNQ92990 594 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 ISG20Q96AZ6 181 aaKnown RBP14.38□□□□□ -0.11
CXXC1-208ENST00000587170 CENPTQ96BT3 561 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 CCNL2Q96S94 520 aaPredicted RBP14.38□□□□□ -0.11
CXXC1-208ENST00000587170 HEPHQ9BQS7 1158 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 WDCPQ9H6R7 721 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 MPP6Q9NZW5 540 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 SPASTQ9UBP0 616 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 APOBEC3BQ9UH17 382 aaKnown RBP14.38□□□□□ -0.11
CXXC1-208ENST00000587170 HOOK1Q9UJC3 728 aaKnown RBP14.38□□□□□ -0.11
CXXC1-208ENST00000587170 MAN1B1Q9UKM7 699 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 PAXBP1Q9Y5B6 917 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 USP9YO00507 2555 aaPredicted RBP14.38□□□□□ -0.11
CXXC1-208ENST00000587170 SPENQ96T58 3664 aaKnown RBP14.38□□□□□ -0.11
CXXC1-208ENST00000587170 NBASA2RRP1 2371 aa14.38□□□□□ -0.11
CXXC1-208ENST00000587170 TERTO14746 1132 aaKnown RBP14.37□□□□□ -0.11
CXXC1-208ENST00000587170 MUSKO15146 869 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 CASC3O15234 703 aaKnown RBP14.37□□□□□ -0.11
CXXC1-208ENST00000587170 EFSO43281 561 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 TNFSF15O95150 251 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 OR1E1P30953 314 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 SCNN1AP37088 669 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 ABL2P42684 1182 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 SNX16P57768 344 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 EIF3IQ13347 325 aaKnown RBP14.37□□□□□ -0.11
CXXC1-208ENST00000587170 SPIDRQ14159 915 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 CARD16Q5EG05 197 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 GJB7Q6PEY0 223 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 CRTC1Q6UUV9 634 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 PASD1Q8IV76 773 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 PHACTR4Q8IZ21 702 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 EXD3Q8N9H8 876 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 CCDC3Q9BQI4 270 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 TCEAL2Q9H3H9 227 aaPredicted RBP14.37□□□□□ -0.11
CXXC1-208ENST00000587170 STARD5Q9NSY2 213 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 APEX2Q9UBZ4 518 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 STAP1Q9ULZ2 295 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 SNX10Q9Y5X0 201 aa14.37□□□□□ -0.11
CXXC1-208ENST00000587170 IGLON5A6NGN9 336 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms