RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 ANKS4BQ8N8V4 417 aa18.82■□□□□ 0.6
RETREG3-205ENST00000586870 ATP6V0D2Q8N8Y2 350 aa18.82■□□□□ 0.6
RETREG3-205ENST00000586870 TTC17Q96AE7 1141 aa18.82■□□□□ 0.6
RETREG3-205ENST00000586870 MTBPQ96DY7 904 aa18.82■□□□□ 0.6
RETREG3-205ENST00000586870 CELF6Q96J87 481 aaKnown RBP18.82■□□□□ 0.6
RETREG3-205ENST00000586870 CDK5RAP1Q96SZ6 601 aaKnown RBP18.82■□□□□ 0.6
RETREG3-205ENST00000586870 RNF38Q9H0F5 515 aa18.82■□□□□ 0.6
RETREG3-205ENST00000586870 SMYD2Q9NRG4 433 aa18.82■□□□□ 0.6
RETREG3-205ENST00000586870 SMPD4Q9NXE4 827 aa18.82■□□□□ 0.6
RETREG3-205ENST00000586870 CCL26Q9Y258 94 aa18.82■□□□□ 0.6
RETREG3-205ENST00000586870 DENND4AQ7Z401 1863 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 CXorf49A8MYA2 514 aaPredicted RBP18.81■□□□□ 0.6
RETREG3-205ENST00000586870 AP3B1O00203 1094 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 COCHO43405 550 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 TAC1P20366 129 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 CD68P34810 354 aaPredicted RBP18.81■□□□□ 0.6
RETREG3-205ENST00000586870 CORO7P57737 925 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 ZBTB17Q13105 803 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 NAB1Q13506 487 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 TRIP4Q15650 581 aaPredicted RBP18.81■□□□□ 0.6
RETREG3-205ENST00000586870 SEPT7Q16181 437 aaKnown RBP18.81■□□□□ 0.6
RETREG3-205ENST00000586870 ACBD5Q5T8D3 534 aaPredicted RBP18.81■□□□□ 0.6
RETREG3-205ENST00000586870 KCTD11Q693B1 232 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 CASC4Q6P4E1 433 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 RTL3Q8N8U3 475 aaKnown RBP18.81■□□□□ 0.6
RETREG3-205ENST00000586870 SH3RF2Q8TEC5 729 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 IRF7Q92985 503 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 PAIP2Q9BPZ3 127 aaKnown RBP18.81■□□□□ 0.6
RETREG3-205ENST00000586870 ELAC2Q9BQ52 826 aaKnown RBP18.81■□□□□ 0.6
RETREG3-205ENST00000586870 GORASP1Q9BQQ3 440 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 C5orf42Q9H799 3197 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 CASS4Q9NQ75 786 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.81■□□□□ 0.6
RETREG3-205ENST00000586870 DONSONQ9NYP3 566 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 ARHGAP26Q9UNA1 814 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 CPQQ9Y646 472 aa18.81■□□□□ 0.6
RETREG3-205ENST00000586870 NOTCH4Q99466 2003 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 ARHGAP42A6NI28 874 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 DFFAO00273 331 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 CACNG3O60359 315 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 KRT38O76015 456 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 MOCS2O96007 188 aaPredicted RBP18.8■□□□□ 0.6
RETREG3-205ENST00000586870 JCHAINP01591 159 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 NFKB1P19838 968 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 CNTFP26441 200 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 FOXN2P32314 431 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 SLC7A9P82251 487 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 IFT88Q13099 833 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 SLC1A5Q15758 541 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 PDK4Q16654 411 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 AFMIDQ63HM1 303 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 TIGD7Q6NT04 549 aaPredicted RBP18.8■□□□□ 0.6
RETREG3-205ENST00000586870 ZNF449Q6P9G9 518 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 TRMT10BQ6PF06 316 aaKnown RBP18.8■□□□□ 0.6
RETREG3-205ENST00000586870 KLHDC8BQ8IXV7 354 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 ATPAF2Q8N5M1 289 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 GRAMD1AQ96CP6 724 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 RSPRY1Q96DX4 576 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 AGAP3Q96P47 875 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 SLC39A8Q9C0K1 460 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 EPHX3Q9H6B9 360 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 BFARQ9NZS9 450 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 DNMT3LQ9UJW3 386 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 DOCK6Q96HP0 2047 aa18.8■□□□□ 0.6
RETREG3-205ENST00000586870 MATN3O15232 486 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 SNX3O60493 162 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 TBX18O95935 607 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 NPY2RP49146 381 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 SIGLEC14Q08ET2 396 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 EFEMP1Q12805 493 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 MTA1Q13330 715 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 SPANXN3Q5MJ09 141 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 SH2D5Q6ZV89 423 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 MARK2Q7KZI7 788 aaKnown RBP18.79■□□□□ 0.6
RETREG3-205ENST00000586870 C14orf80Q86SX3 495 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 OTUD6BQ8N6M0 293 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 CSGALNACT1Q8TDX6 532 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 CDKL2Q92772 493 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 OXNAD1Q96HP4 312 aaPredicted RBP18.79■□□□□ 0.6
RETREG3-205ENST00000586870 APOPT1Q96IL0 206 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 PPP1R2P1Q96PQ5 205 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 IL12RB2Q99665 862 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 LRRC40Q9H9A6 602 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 SLC2A4RGQ9NR83 387 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 FGFR1OP2Q9NVK5 253 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 SYBUQ9NX95 663 aa18.79■□□□□ 0.6
RETREG3-205ENST00000586870 PPARGC1AQ9UBK2 798 aaKnown RBP18.79■□□□□ 0.6
RETREG3-205ENST00000586870 TRIM49D1C9J1S8 452 aa18.78■□□□□ 0.6
RETREG3-205ENST00000586870 LEFTY2O00292 366 aa18.78■□□□□ 0.6
RETREG3-205ENST00000586870 STK25O00506 426 aa18.78■□□□□ 0.6
RETREG3-205ENST00000586870 POLBP06746 335 aa18.78■□□□□ 0.6
RETREG3-205ENST00000586870 RHOQP17081 205 aa18.78■□□□□ 0.6
RETREG3-205ENST00000586870 FRG1Q14331 258 aaKnown RBP18.78■□□□□ 0.6
RETREG3-205ENST00000586870 PIK3R6Q5UE93 754 aa18.78■□□□□ 0.6
RETREG3-205ENST00000586870 LVRNQ6Q4G3 990 aa18.78■□□□□ 0.6
RETREG3-205ENST00000586870 TRIM67Q6ZTA4 783 aa18.78■□□□□ 0.6
RETREG3-205ENST00000586870 OR52K1Q8NGK4 314 aa18.78■□□□□ 0.6
RETREG3-205ENST00000586870 TCP10LQ8TDR4 215 aa18.78■□□□□ 0.6
RETREG3-205ENST00000586870 SERAC1Q96JX3 654 aa18.78■□□□□ 0.6
RETREG3-205ENST00000586870 MLPHQ9BV36 600 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms