RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 ABL2P42684 1182 aa19.69■□□□□ 0.74
TRAF4-216ENST00000586813 RABIFP47224 123 aa19.69■□□□□ 0.74
TRAF4-216ENST00000586813 C15orf59Q2T9L4 293 aaPredicted RBP19.69■□□□□ 0.74
TRAF4-216ENST00000586813 TCP11X2Q5H9J9 407 aa19.69■□□□□ 0.74
TRAF4-216ENST00000586813 ZNF677Q86XU0 584 aa19.69■□□□□ 0.74
TRAF4-216ENST00000586813 PLPP6Q8IY26 295 aa19.69■□□□□ 0.74
TRAF4-216ENST00000586813 DEPDC7Q96QD5 511 aa19.69■□□□□ 0.74
TRAF4-216ENST00000586813 KLF6Q99612 283 aaPredicted RBP19.69■□□□□ 0.74
TRAF4-216ENST00000586813 USP29Q9HBJ7 922 aa19.69■□□□□ 0.74
TRAF4-216ENST00000586813 EVA1BQ9NVM1 165 aa19.69■□□□□ 0.74
TRAF4-216ENST00000586813 NEU3Q9UQ49 428 aa19.69■□□□□ 0.74
TRAF4-216ENST00000586813 H3BM21 787 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 TSPAN6O43657 245 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 RHOQP17081 205 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 MMP8P22894 467 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 EEF1GP26641 437 aaKnown RBP19.68■□□□□ 0.74
TRAF4-216ENST00000586813 SDC4P31431 198 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 GKP32189 559 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 ADRA1BP35368 520 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 MAPKAPK2P49137 400 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 GEMIN4P57678 1058 aaKnown RBP19.68■□□□□ 0.74
TRAF4-216ENST00000586813 TLE3Q04726 772 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 CCDC173Q0VFZ6 552 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 ARL13BQ3SXY8 428 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 CCDC14Q49A88 953 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 RWDD4Q6NW29 188 aaKnown RBP19.68■□□□□ 0.74
TRAF4-216ENST00000586813 ZCCHC8Q6NZY4 707 aaKnown RBP19.68■□□□□ 0.74
TRAF4-216ENST00000586813 NLRP14Q86W24 1093 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 RYBPQ8N488 228 aaPredicted RBP19.68■□□□□ 0.74
TRAF4-216ENST00000586813 RXFP2Q8WXD0 754 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 ARHGEF2Q92974 986 aaKnown RBP19.68■□□□□ 0.74
TRAF4-216ENST00000586813 RAB7BQ96AH8 199 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 LENG8Q96PV6 779 aaPredicted RBP19.68■□□□□ 0.74
TRAF4-216ENST00000586813 C1QTNF2Q9BXJ5 285 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 GANQ9H2C0 597 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 TMEM248Q9NWD8 314 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 TAB2Q9NYJ8 693 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 DNAI1Q9UI46 699 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 ITM2BQ9Y287 266 aa19.68■□□□□ 0.74
TRAF4-216ENST00000586813 IGLON5A6NGN9 336 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 C2CD4BA6NLJ0 364 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 C16orf96A6NNT2 1141 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 FPGTO14772 594 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 ATXN7O15265 892 aaPredicted RBP19.67■□□□□ 0.74
TRAF4-216ENST00000586813 GFPT2O94808 682 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 CYP1A1P04798 512 aaPredicted RBP19.67■□□□□ 0.74
TRAF4-216ENST00000586813 MPOP05164 745 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 DUSP3P51452 185 aaPredicted RBP19.67■□□□□ 0.74
TRAF4-216ENST00000586813 FMO1Q01740 532 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 CDR2Q01850 454 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 SGCGQ13326 291 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 PDE1CQ14123 709 aaPredicted RBP19.67■□□□□ 0.74
TRAF4-216ENST00000586813 POLD3Q15054 466 aaPredicted RBP19.67■□□□□ 0.74
TRAF4-216ENST00000586813 ZNF805Q5CZA5 627 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 PHLDB2Q86SQ0 1253 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 SPACA3Q8IXA5 215 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 DENND6BQ8NEG7 585 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 OR2AP1Q8NGE2 309 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 JOSD2Q8TAC2 188 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 IFI44Q8TCB0 444 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 VOPP1Q96AW1 172 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 C11orf70Q9BRQ4 267 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 NUP62CLQ9H1M0 184 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 OSBPL2Q9H1P3 480 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 RETREG1Q9H6L5 497 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 KLF15Q9UIH9 416 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 GGT7Q9UJ14 662 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 LRRK1Q38SD2 2015 aa19.67■□□□□ 0.74
TRAF4-216ENST00000586813 FAM72CH0Y354 149 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 KRIT1O00522 736 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 NEMP1O14524 444 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 SPINT1O43278 529 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 CSO75390 466 aaKnown RBP19.66■□□□□ 0.74
TRAF4-216ENST00000586813 LRIG2O94898 1065 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 GSRP00390 522 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 PRB1P04280 392 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 CHRNB2P17787 502 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 PFN3P60673 137 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 GABREP78334 506 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 TPRG1LQ5T0D9 272 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 FAM72AQ5TYM5 149 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 FAM72DQ6L9T8 149 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 STRADAQ7RTN6 431 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 FAM72BQ86X60 149 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 CCDC185Q8N715 623 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 SLC30A5Q8TAD4 765 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 GPT2Q8TD30 523 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 ASB12Q8WXK4 309 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 SLC39A7Q92504 469 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 TBC1D31Q96DN5 1066 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 LGMNQ99538 433 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 ABCG4Q9H172 646 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 MAGEH1Q9H213 219 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 IPO11Q9UI26 975 aaKnown RBP19.66■□□□□ 0.74
TRAF4-216ENST00000586813 HPCAL4Q9UM19 191 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 CSNK1G3Q9Y6M4 447 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 KALRNO60229 2985 aa19.66■□□□□ 0.74
TRAF4-216ENST00000586813 TK2O00142 265 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 AQP9O43315 295 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 RAMP2O60895 175 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms