RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 FRS2Q8WU20 508 aa16.26■□□□□ 0.19
CSNK1D-223ENST00000584472 HDAC11Q96DB2 347 aa16.26■□□□□ 0.19
CSNK1D-223ENST00000584472 ERLEC1Q96DZ1 483 aa16.26■□□□□ 0.19
CSNK1D-223ENST00000584472 SIPA1Q96FS4 1042 aa16.26■□□□□ 0.19
CSNK1D-223ENST00000584472 RSPH9Q9H1X1 276 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-223ENST00000584472 USP36Q9P275 1121 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-223ENST00000584472 IPO11Q9UI26 975 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-223ENST00000584472 LAMA1P25391 3075 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 CBX4O00257 560 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 PPP1R12AO14974 1030 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 SNAP91O60641 907 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 MAFKO60675 156 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 RNASEH1O60930 286 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 SIN3BO75182 1162 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 ZMPSTE24O75844 475 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 IGLV3-19P01714 112 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 GEMIN4P57678 1058 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 XRCC4Q13426 336 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 PDK1Q15118 436 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 ZNF776Q68DI1 518 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 SLC36A4Q6YBV0 504 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 ATPAF2Q8N5M1 289 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 TSGA13Q96PP4 275 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 FAM118BQ9BPY3 351 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 DUSP15Q9H1R2 295 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 SLC6A17Q9H1V8 727 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 PDFQ9HBH1 243 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 ITM2CQ9NQX7 267 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 VPS45Q9NRW7 570 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 CDC23Q9UJX2 597 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 HPCAL4Q9UM19 191 aa16.25■□□□□ 0.19
CSNK1D-223ENST00000584472 RALGAPA1Q6GYQ0 2036 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 ZSCAN5CA6NGD5 496 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 J3KR12 359 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 PDE2AO00408 941 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 MCF2LO15068 1137 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 PRAMEF11O60813 436 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 ACADMP11310 421 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 SRCP12931 536 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 CCNCP24863 283 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 PAFAH1B1P43034 410 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 SERPINH1P50454 418 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 EIF3EP60228 445 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 RPS14P62263 151 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 ZNF33AQ06730 810 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 IL10RBQ08334 325 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 PPIDQ08752 370 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 DLG2Q15700 870 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 PMS2CLQ68D20 193 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 DSG4Q86SJ6 1040 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 ZC3H18Q86VM9 953 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 PRELID2Q8N945 189 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 ATP11CQ8NB49 1132 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 CCNYQ8ND76 341 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 SLC35B2Q8TB61 432 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 LRRN4Q8WUT4 740 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 C1orf54Q8WWF1 131 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 RLN3Q8WXF3 142 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 ATG4AQ8WYN0 398 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 PTPRN2Q92932 1015 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 LGMNQ99538 433 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 AP1M1Q9BXS5 423 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 FRMD8P1Q9BZ68 369 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 CEP44Q9C0F1 390 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 BRD8Q9H0E9 1235 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 MTG2Q9H4K7 406 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 SP110Q9HB58 689 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 MBD1Q9UIS9 605 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 SCML1Q9UN30 329 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 INVSQ9Y283 1065 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 SDK1Q7Z5N4 2213 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 ABCA7Q8IZY2 2146 aa16.24■□□□□ 0.19
CSNK1D-223ENST00000584472 IGHV1OR15-9A0A0B4J2B8 117 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 HACD1B0YJ81 288 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 ALOX15BO15296 676 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 MAP3K13O43283 966 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 LIASO43766 372 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 PEX11BO96011 259 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 MT-CO1P00395 513 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 RBP3P10745 1247 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 BCKDHBP21953 392 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 OXTRP30559 389 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 MPLP40238 635 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 DPP6P42658 865 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 TPMTP51580 245 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 SFSWAPQ12872 951 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 TUBB2AQ13885 445 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 PRKD1Q15139 912 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 CCNG2Q16589 344 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 TTC31Q49AM3 519 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 ACCSLQ4AC99 568 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 SLC45A4Q5BKX6 768 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 TIGD7Q6NT04 549 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 LINGO4Q6UY18 593 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 B4GALNT4Q76KP1 1039 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 LPCAT2Q7L5N7 544 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 CCDC13Q8IYE1 715 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 TFB1MQ8WVM0 346 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 CCDC114Q96M63 670 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 QKIQ96PU8 341 aaKnown RBP eCLIP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms