RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 FLRT2O43155 660 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 BNIP3LO60238 219 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 TRIM16O95361 564 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 RXRGP48443 463 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 SUOXP51687 545 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 NEK3P51956 506 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 PPP2CBP62714 309 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 PPP2CAP67775 309 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 RAD51Q06609 339 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 GRM3Q14832 879 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 SUZ12Q15022 739 aaKnown RBP10.06□□□□□ -0.8
SKA2-208ENST00000583927 SLC18A3Q16572 532 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 ASTE1Q2TB18 679 aaPredicted RBP10.06□□□□□ -0.8
SKA2-208ENST00000583927 TMEM259Q4ZIN3 620 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 SLC45A4Q5BKX6 768 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 ZNF805Q5CZA5 627 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 KIAA1161Q6NSJ0 714 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 RFX8Q6ZV50 586 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 ADAT2Q7Z6V5 191 aaKnown RBP10.06□□□□□ -0.8
SKA2-208ENST00000583927 HORMAD1Q86X24 394 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 DNAAF5Q86Y56 855 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 NAXDQ8IW45 347 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 OXR1Q8N573 874 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 TMEM145Q8NBT3 493 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 OR2I1PQ8NGU4 316 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 BAHD1Q8TBE0 780 aaPredicted RBP10.06□□□□□ -0.8
SKA2-208ENST00000583927 FAM71BQ8TC56 605 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 CPLX3Q8WVH0 158 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 ASB12Q8WXK4 309 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 ARHGEF26Q96DR7 871 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 SERAC1Q96JX3 654 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 SLC6A18Q96N87 628 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.06□□□□□ -0.8
SKA2-208ENST00000583927 KLC2Q9H0B6 622 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 THAP2Q9H0W7 228 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 DHX35Q9H5Z1 703 aaKnown RBP10.06□□□□□ -0.8
SKA2-208ENST00000583927 ZWILCHQ9H900 591 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 PDFQ9HBH1 243 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 UVRAGQ9P2Y5 699 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 PCSK1NQ9UHG2 260 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 IP6K2Q9UHH9 426 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 ANGPTL2Q9UKU9 493 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 FNDC3AQ9Y2H6 1198 aaKnown RBP10.06□□□□□ -0.8
SKA2-208ENST00000583927 FCF1Q9Y324 198 aaKnown RBP10.06□□□□□ -0.8
SKA2-208ENST00000583927 SNX11Q9Y5W9 270 aa10.06□□□□□ -0.8
SKA2-208ENST00000583927 LRP4O75096 1905 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 USP24Q9UPU5 2620 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 CACNA1BQ00975 2339 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 A0A1B0GTQ1 180 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 FAM221BA6H8Z2 402 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 ARHGAP42A6NI28 874 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 TLR4O00206 839 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 RNF103O00237 685 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 PLK4O00444 970 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 BUB1O43683 1085 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 SH3BP5O60239 455 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 PRAMEF11O60813 436 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 TMCC1O94876 653 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 WNT1P04628 370 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 ADRB3P13945 408 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 ERCC2P18074 760 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 CSNK1DP48730 415 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 CCT8P50990 548 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 C21orf59P57076 290 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 NXPH1P58417 271 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 DPYSQ14117 519 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 RFTN1Q14699 578 aaPredicted RBP10.05□□□□□ -0.8
SKA2-208ENST00000583927 CA9Q16790 459 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 ZNF284Q2VY69 593 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 MYLK3Q32MK0 819 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 KCNT1Q5JUK3 1230 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 CCDC122Q5T0U0 273 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 TMCO4Q5TGY1 634 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 SARM1Q6SZW1 724 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 POLNQ7Z5Q5 900 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 VSTM4Q8IW00 320 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 ARHGAP12Q8IWW6 846 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 GRIN3AQ8TCU5 1115 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 HMCESQ96FZ2 354 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 GDAP1L1Q96MZ0 367 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 LENG8Q96PV6 779 aaPredicted RBP10.05□□□□□ -0.8
SKA2-208ENST00000583927 KCTD15Q96SI1 283 aaPredicted RBP10.05□□□□□ -0.8
SKA2-208ENST00000583927 ELF4Q99607 663 aaPredicted RBP10.05□□□□□ -0.8
SKA2-208ENST00000583927 CDC6Q99741 560 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 IL21RQ9HBE5 538 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 RCOR3Q9P2K3 495 aaPredicted RBP10.05□□□□□ -0.8
SKA2-208ENST00000583927 MYO1AQ9UBC5 1043 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 DKK3Q9UBP4 350 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 ANAPC7Q9UJX3 599 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 PCOLCE2Q9UKZ9 415 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 FADS3Q9Y5Q0 445 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 ACTL7AQ9Y615 435 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 HS3ST3A1Q9Y663 406 aa10.05□□□□□ -0.8
SKA2-208ENST00000583927 A0A1W2PQU0 124 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 H0Y8X5 98 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 MYO1FO00160 1098 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 WNT9AO14904 365 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 AREL1O15033 823 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 TSPAN6O43657 245 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms