RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 CSNK1EP49674 416 aaKnown RBP25.32■■□□□ 1.64
TSEN54-209ENST00000583454 SERPINH1P50454 418 aaKnown RBP25.32■■□□□ 1.64
TSEN54-209ENST00000583454 ELAVL3Q14576 367 aaKnown RBP25.32■■□□□ 1.64
TSEN54-209ENST00000583454 ACCSLQ4AC99 568 aa25.32■■□□□ 1.64
TSEN54-209ENST00000583454 ZNF776Q68DI1 518 aaPredicted RBP25.32■■□□□ 1.64
TSEN54-209ENST00000583454 STK40Q8N2I9 435 aa25.32■■□□□ 1.64
TSEN54-209ENST00000583454 ADAMTS14Q8WXS8 1223 aa25.32■■□□□ 1.64
TSEN54-209ENST00000583454 HMCESQ96FZ2 354 aa25.32■■□□□ 1.64
TSEN54-209ENST00000583454 BTBD1Q9H0C5 482 aa25.32■■□□□ 1.64
TSEN54-209ENST00000583454 TM9SF3Q9HD45 589 aa25.32■■□□□ 1.64
TSEN54-209ENST00000583454 TM7SF3Q9NS93 570 aa25.32■■□□□ 1.64
TSEN54-209ENST00000583454 HPCAL4Q9UM19 191 aa25.32■■□□□ 1.64
TSEN54-209ENST00000583454 GOLGA6L3A6NEY3 463 aa25.31■■□□□ 1.64
TSEN54-209ENST00000583454 ZSCAN5CA6NGD5 496 aaPredicted RBP25.31■■□□□ 1.64
TSEN54-209ENST00000583454 SRRM3A6NNA2 597 aaPredicted RBP25.31■■□□□ 1.64
TSEN54-209ENST00000583454 ZNF821O75541 412 aaPredicted RBP25.31■■□□□ 1.64
TSEN54-209ENST00000583454 DNTTP04053 509 aa25.31■■□□□ 1.64
TSEN54-209ENST00000583454 SLC1A1P43005 524 aa25.31■■□□□ 1.64
TSEN54-209ENST00000583454 AFF3P51826 1226 aaKnown RBP25.31■■□□□ 1.64
TSEN54-209ENST00000583454 CDH6P55285 790 aa25.31■■□□□ 1.64
TSEN54-209ENST00000583454 GEMIN4P57678 1058 aaKnown RBP25.31■■□□□ 1.64
TSEN54-209ENST00000583454 SERINC3Q13530 473 aa25.31■■□□□ 1.64
TSEN54-209ENST00000583454 KIF19Q2TAC6 998 aa25.31■■□□□ 1.64
TSEN54-209ENST00000583454 IL27RAQ6UWB1 636 aa25.31■■□□□ 1.64
TSEN54-209ENST00000583454 PNPLA1Q8N8W4 532 aa25.31■■□□□ 1.64
TSEN54-209ENST00000583454 ZCCHC14Q8WYQ9 949 aaKnown RBP25.31■■□□□ 1.64
TSEN54-209ENST00000583454 SNX19Q92543 992 aa25.31■■□□□ 1.64
TSEN54-209ENST00000583454 CEP44Q9C0F1 390 aa25.31■■□□□ 1.64
TSEN54-209ENST00000583454 PABPC3Q9H361 631 aaKnown RBP25.31■■□□□ 1.64
TSEN54-209ENST00000583454 SERGEFQ9UGK8 458 aa25.31■■□□□ 1.64
TSEN54-209ENST00000583454 PJA2O43164 708 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 RNASEH1O60930 286 aaKnown RBP25.3■■□□□ 1.64
TSEN54-209ENST00000583454 IGHV4-34P06331 123 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 AMPD1P23109 780 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 NOP2P46087 812 aaKnown RBP25.3■■□□□ 1.64
TSEN54-209ENST00000583454 KRT81Q14533 505 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 PDK2Q15119 407 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 LRRC38Q5VT99 294 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 LAYNQ6UX15 382 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 Q6ZVU0 165 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 SLCO6A1Q86UG4 719 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 ARHGAP12Q8IWW6 846 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 LZTR1Q8N653 840 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 ACRBPQ8NEB7 543 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 SLC39A8Q9C0K1 460 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 SGK2Q9HBY8 427 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 ETNK2Q9NVF9 386 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 SALL4Q9UJQ4 1053 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 SCML1Q9UN30 329 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 PCDHGB2Q9Y5G2 931 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 SNX11Q9Y5W9 270 aa25.3■■□□□ 1.64
TSEN54-209ENST00000583454 BTNL10A8MVZ5 291 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 MCF2LO15068 1137 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 ALOX15BO15296 676 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 BUB1BO60566 1050 aaPredicted RBP25.29■■□□□ 1.64
TSEN54-209ENST00000583454 CD48P09326 243 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 GRIA4P48058 902 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 VAV2P52735 878 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 DPYSL3Q14195 570 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 CST6Q15828 149 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 TTC31Q49AM3 519 aaPredicted RBP25.29■■□□□ 1.64
TSEN54-209ENST00000583454 C22orf39Q6P5X5 142 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 USP30Q70CQ3 517 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 NPWQ8N729 165 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 KCTD6Q8NC69 237 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 OR2A12Q8NGT7 310 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 ISG20Q96AZ6 181 aaKnown RBP25.29■■□□□ 1.64
TSEN54-209ENST00000583454 CELF6Q96J87 481 aaKnown RBP25.29■■□□□ 1.64
TSEN54-209ENST00000583454 LACRTQ9GZZ8 138 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 TOR4AQ9NXH8 423 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 PCDHB9Q9Y5E1 797 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 ACTL7AQ9Y615 435 aa25.29■■□□□ 1.64
TSEN54-209ENST00000583454 CD27P26842 260 aa25.28■■□□□ 1.64
TSEN54-209ENST00000583454 GJC1P36383 396 aa25.28■■□□□ 1.64
TSEN54-209ENST00000583454 MMAAQ8IVH4 418 aaKnown RBP25.28■■□□□ 1.64
TSEN54-209ENST00000583454 PLPP6Q8IY26 295 aa25.28■■□□□ 1.64
TSEN54-209ENST00000583454 PCDH20Q8N6Y1 951 aaKnown RBP25.28■■□□□ 1.64
TSEN54-209ENST00000583454 OR8D1Q8WZ84 308 aa25.28■■□□□ 1.64
TSEN54-209ENST00000583454 CALR3Q96L12 384 aaKnown RBP25.28■■□□□ 1.64
TSEN54-209ENST00000583454 PPM1HQ9ULR3 514 aa25.28■■□□□ 1.64
TSEN54-209ENST00000583454 BTBD3Q9Y2F9 522 aa25.28■■□□□ 1.64
TSEN54-209ENST00000583454 ANKRD6Q9Y2G4 727 aa25.28■■□□□ 1.64
TSEN54-209ENST00000583454 ALG6Q9Y672 507 aa25.28■■□□□ 1.64
TSEN54-209ENST00000583454 DUSP10Q9Y6W6 482 aa25.28■■□□□ 1.64
TSEN54-209ENST00000583454 APC2O95996 2303 aa25.28■■□□□ 1.64
TSEN54-209ENST00000583454 DOCK9Q9BZ29 2069 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 ARHGAP42A6NI28 874 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 BUB1O43683 1085 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 DKK1O94907 266 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 FSBPO95073 299 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 COMTP21964 271 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 PAPOLAP51003 745 aaKnown RBP25.27■■□□□ 1.64
TSEN54-209ENST00000583454 MMRN1Q13201 1228 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 INO80DQ53TQ3 878 aaPredicted RBP25.27■■□□□ 1.64
TSEN54-209ENST00000583454 TMCO3Q6UWJ1 677 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 DSG4Q86SJ6 1040 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 MAP7D3Q8IWC1 876 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 TPCN2Q8NHX9 752 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 SETD7Q8WTS6 366 aaKnown RBP25.27■■□□□ 1.64
TSEN54-209ENST00000583454 CASKIN2Q8WXE0 1202 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms