RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 A0A0D9SEW6 157 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 TRIM49BA6NDI0 452 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 LMO7DNF2Z398 122 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 NTN3O00634 580 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-215ENST00000583328 NEMP1O14524 444 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 THAP12O43422 761 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 AP1G1O43747 822 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 NOBOXO60393 691 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 GRAP2O75791 330 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 NTRK1P04629 796 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 GLI1P08151 1106 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 ITGB7P26010 798 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 L1CAMP32004 1257 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 THOP1P52888 689 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 PFN3P60673 137 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 MEA1Q16626 185 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 C5orf22Q49AR2 442 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 CCDC40Q4G0X9 1142 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 ALFQ53S48 1182 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 EFHC1Q5JVL4 640 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 FAXCQ5TGI0 409 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 ZNF658Q5TYW1 1059 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-215ENST00000583328 PHACTR4Q8IZ21 702 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 DCAF4L2Q8NA75 395 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 ZSCAN1Q8NBB4 408 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 EHBP1Q8NDI1 1231 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 ZNF606Q8WXB4 792 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 PPP1R13BQ96KQ4 1090 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 KREMEN1Q96MU8 473 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 GFM1Q96RP9 751 aaKnown RBP12.53□□□□□ -0.4
TOP3A-215ENST00000583328 KLF6Q99612 283 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-215ENST00000583328 HEPHQ9BQS7 1158 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 SPON2Q9BUD6 331 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 C1QTNF2Q9BXJ5 285 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 ASNSD1Q9NWL6 643 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 SEPT10Q9P0V9 454 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 SEPT3Q9UH03 358 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 MAN1B1Q9UKM7 699 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 DOLKQ9UPQ8 538 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 WASF2Q9Y6W5 498 aa12.53□□□□□ -0.4
TOP3A-215ENST00000583328 YY2O15391 372 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 P4HA2O15460 535 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 TSPAN6O43657 245 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 HSF2BPO75031 334 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 AFPP02771 609 aaKnown RBP12.52□□□□□ -0.41
TOP3A-215ENST00000583328 JMJD7P0C870 316 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 HGFP14210 728 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 TSHRP16473 764 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 LRRC63Q05C16 580 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 PDCLQ13371 301 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 COBLL1Q53SF7 1204 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 CARD16Q5EG05 197 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 MANEAQ5SRI9 462 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 B3GNT8Q7Z7M8 397 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 SETD3Q86TU7 594 aaPredicted RBP12.52□□□□□ -0.41
TOP3A-215ENST00000583328 OR7D4Q8NG98 312 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 SEMA3CQ99985 751 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 LRRC61Q9BV99 259 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 FOXP3Q9BZS1 431 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 WDCPQ9H6R7 721 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 ANKMY1Q9P2S6 941 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 PISDQ9UG56 409 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 CNTN6Q9UQ52 1028 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 PTPN13Q12923 2485 aa12.52□□□□□ -0.41
TOP3A-215ENST00000583328 M0QYT0 321 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 PPFIA2O75334 1257 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 LIPCP11150 499 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 GNA15P30679 374 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 OR1E1P30953 314 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 NOS2P35228 1153 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 PPP1R2P41236 205 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 CCL7P80098 99 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 PPARDQ03181 441 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 SLC20A2Q08357 652 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 MORC3Q14149 939 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 TBR1Q16650 682 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 KLHL40Q2TBA0 621 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 CCDC183Q5T5S1 534 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 RETSATQ6NUM9 610 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 LRRC31Q6UY01 552 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 RBM43Q6ZSC3 357 aaKnown RBP12.51□□□□□ -0.41
TOP3A-215ENST00000583328 PARS2Q7L3T8 475 aaKnown RBP12.51□□□□□ -0.41
TOP3A-215ENST00000583328 TFAP2DQ7Z6R9 452 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 SDR16C5Q8N3Y7 309 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 PCDH20Q8N6Y1 951 aaKnown RBP12.51□□□□□ -0.41
TOP3A-215ENST00000583328 DENND6BQ8NEG7 585 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 SCG3Q8WXD2 468 aaKnown RBP12.51□□□□□ -0.41
TOP3A-215ENST00000583328 ASB12Q8WXK4 309 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 CCDC74AQ96AQ1 378 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 TBATAQ96M53 351 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 CEP63Q96MT8 703 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 TMEM74Q96NL1 305 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 CEP44Q9C0F1 390 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 CLPBQ9H078 707 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 TKTL2Q9H0I9 626 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 UBE2TQ9NPD8 197 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-215ENST00000583328 MPP6Q9NZW5 540 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 SIRPGQ9P1W8 387 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 ACSL6Q9UKU0 697 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 PCDHB11Q9Y5F2 797 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms