RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 J3KR12 359 aa22.95■■□□□ 1.26
CCDC47-204ENST00000582252 CTSAP10619 480 aa22.95■■□□□ 1.26
CCDC47-204ENST00000582252 CHI3L2Q15782 390 aa22.95■■□□□ 1.26
CCDC47-204ENST00000582252 TTC31Q49AM3 519 aaPredicted RBP22.95■■□□□ 1.26
CCDC47-204ENST00000582252 N4BP2L1Q5TBK1 243 aaPredicted RBP22.95■■□□□ 1.26
CCDC47-204ENST00000582252 KDELC1Q6UW63 502 aa22.95■■□□□ 1.26
CCDC47-204ENST00000582252 BBS5Q8N3I7 341 aa22.95■■□□□ 1.26
CCDC47-204ENST00000582252 PPP1R14CQ8TAE6 165 aa22.95■■□□□ 1.26
CCDC47-204ENST00000582252 PSMG2Q969U7 264 aa22.95■■□□□ 1.26
CCDC47-204ENST00000582252 TRMT2BQ96GJ1 504 aaKnown RBP22.95■■□□□ 1.26
CCDC47-204ENST00000582252 ZNF599Q96NL3 588 aa22.95■■□□□ 1.26
CCDC47-204ENST00000582252 TXLNGQ9NUQ3 528 aa22.95■■□□□ 1.26
CCDC47-204ENST00000582252 GGT7Q9UJ14 662 aa22.95■■□□□ 1.26
CCDC47-204ENST00000582252 POLD2P49005 469 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 TMCO4Q5TGY1 634 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 NADSYN1Q6IA69 706 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 FSTL4Q6MZW2 842 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 MYRFLQ96LU7 910 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 RANBP9Q96S59 729 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 AGAP2Q99490 1192 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 ECT2Q9H8V3 914 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 CYP4F11Q9HBI6 524 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 MTO1Q9Y2Z2 717 aaKnown RBP22.94■■□□□ 1.26
CCDC47-204ENST00000582252 HEATR9A2RTY3 570 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 PLIN3O60664 434 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 KCNQ1P51787 676 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 ARFIP2P53365 341 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 CDH4P55283 916 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 SLC10A7Q0GE19 358 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 LBRQ14739 615 aaKnown RBP22.94■■□□□ 1.26
CCDC47-204ENST00000582252 NLRP9Q7RTR0 991 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 CNTN4Q8IWV2 1026 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 DDX50Q9BQ39 737 aaKnown RBP22.94■■□□□ 1.26
CCDC47-204ENST00000582252 MAGEH1Q9H213 219 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 RHOJQ9H4E5 214 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 UXTQ9UBK9 157 aaPredicted RBP22.94■■□□□ 1.26
CCDC47-204ENST00000582252 MID2Q9UJV3 735 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 MAFFQ9ULX9 164 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 YIPF1Q9Y548 306 aa22.94■■□□□ 1.26
CCDC47-204ENST00000582252 C5orf67F2Z3F1 127 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 SEC24AO95486 1093 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 RB1P06400 928 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 ELF1P32519 619 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 UBE3AQ05086 875 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 CDK18Q07002 472 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 STX3Q13277 289 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 THOC5Q13769 683 aaKnown RBP22.93■■□□□ 1.26
CCDC47-204ENST00000582252 SMAD1Q15797 465 aaKnown RBP22.93■■□□□ 1.26
CCDC47-204ENST00000582252 PCSK7Q16549 785 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 KIAA0930Q6ICG6 404 aaPredicted RBP22.93■■□□□ 1.26
CCDC47-204ENST00000582252 LCA5Q86VQ0 697 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 CRLF3Q8IUI8 442 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 SREK1Q8WXA9 508 aaKnown RBP22.93■■□□□ 1.26
CCDC47-204ENST00000582252 VPS39Q96JC1 886 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 TSNARE1Q96NA8 513 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 SAMD11Q96NU1 681 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 GDF15Q99988 308 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 FAM167BQ9BTA0 163 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 MECRQ9BV79 373 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 ANKRD6Q9Y2G4 727 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 MYO7AQ13402 2215 aa22.93■■□□□ 1.26
CCDC47-204ENST00000582252 GRXCR1A8MXD5 290 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 PRAMEF11O60813 436 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 LILRB3O75022 631 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 HMGA1P17096 107 aaKnown RBP22.92■■□□□ 1.26
CCDC47-204ENST00000582252 CD86P42081 329 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 SERPINH1P50454 418 aaKnown RBP22.92■■□□□ 1.26
CCDC47-204ENST00000582252 BST1Q10588 318 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 OVGP1Q12889 678 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 RAB33AQ14088 237 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 ZNF235Q14590 738 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 FASTKD1Q53R41 847 aaKnown RBP22.92■■□□□ 1.26
CCDC47-204ENST00000582252 FAM109BQ6ICB4 259 aaPredicted RBP22.92■■□□□ 1.26
CCDC47-204ENST00000582252 CIR1Q86X95 450 aaPredicted RBP22.92■■□□□ 1.26
CCDC47-204ENST00000582252 ERP27Q96DN0 273 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 KLHL5Q96PQ7 755 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 POLR1EQ9GZS1 481 aaKnown RBP22.92■■□□□ 1.26
CCDC47-204ENST00000582252 MYLK2Q9H1R3 596 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 ATP13A1Q9HD20 1204 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 CHKBQ9Y259 395 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 MYLKQ15746 1914 aa22.92■■□□□ 1.26
CCDC47-204ENST00000582252 COCHO43405 550 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 MYOGP15173 224 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 LAMB3Q13751 1172 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 SEPT6Q14141 434 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 TMC7Q7Z402 723 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 CALML6Q8TD86 181 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 AUTS2Q8WXX7 1259 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 GPR22Q99680 433 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 C17orf80Q9BSJ5 609 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 MCMBPQ9BTE3 642 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 THAP1Q9NVV9 213 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 DCTN4Q9UJW0 460 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 MTCL1Q9Y4B5 1905 aaKnown RBP22.91■■□□□ 1.26
CCDC47-204ENST00000582252 SIN3BO75182 1162 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 CLDN11O75508 207 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 PROCP04070 461 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 APOA4P06727 396 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 CA3P07451 260 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 DNAJB1P25685 340 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms