RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 POLD4Q9HCU8 107 aa6.87□□□□□ -1.31
PPP4R1-216ENST00000580283 PRMT7Q9NVM4 692 aaPredicted RBP6.87□□□□□ -1.31
PPP4R1-216ENST00000580283 OBP2AQ9NY56 170 aa6.87□□□□□ -1.31
PPP4R1-216ENST00000580283 DDX25Q9UHL0 483 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-216ENST00000580283 YIPF1Q9Y548 306 aa6.87□□□□□ -1.31
PPP4R1-216ENST00000580283 GPR45Q9Y5Y3 372 aa6.87□□□□□ -1.31
PPP4R1-216ENST00000580283 UTP20O75691 2785 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-216ENST00000580283 TMEM131Q92545 1883 aa6.87□□□□□ -1.31
PPP4R1-216ENST00000580283 TCHHQ07283 1943 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 NID2Q14112 1375 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 H0Y626 953 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 SYN3O14994 580 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 TRAPPC3O43617 180 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 GJB3O75712 270 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 TRIM16O95361 564 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 LYPLA2O95372 231 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 APBB3O95704 486 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 ADH4P08319 380 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 MAKP20794 623 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 DHPSP49366 369 aaPredicted RBP6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 RCAN1P53805 252 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 GRSF1Q12849 480 aaKnown RBP eCLIP6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 MALLQ13021 153 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 KARSQ15046 597 aaKnown RBP6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 CTXN3Q4LDR2 81 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 TPH2Q8IWU9 490 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 ELMOD1Q8N336 334 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 ZNF843Q8N446 348 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 LEMD2Q8NC56 503 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 OR7D4Q8NG98 312 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 CPT1CQ8TCG5 803 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 CCDC12Q8WUD4 166 aaPredicted RBP6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 ADAMTS14Q8WXS8 1223 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 C18orf25Q96B23 403 aaPredicted RBP6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 UROC1Q96N76 676 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 AIFM3Q96NN9 605 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 MENTQ9BUN1 341 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 CPEB1Q9BZB8 566 aaKnown RBP6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 POLR3FQ9H1D9 316 aaPredicted RBP6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 BCO1Q9HAY6 547 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 TRPS1Q9UHF7 1281 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 PILRBQ9UKJ0 227 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 RAI2Q9Y5P3 530 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 COL6A6A6NMZ7 2263 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 CABIN1Q9Y6J0 2220 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 BOD1L1Q8NFC6 3051 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 PTPN13Q12923 2485 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 MYH11P35749 1972 aa6.86□□□□□ -1.31
PPP4R1-216ENST00000580283 LRRIQ4A6NIV6 560 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 H7C4K7 107 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 K7EQS6 105 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 ACKR2O00590 384 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 PODXLO00592 558 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 TRIM24O15164 1050 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 SH3BP5O60239 455 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 DKC1O60832 514 aaKnown RBP eCLIP6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 SCAF4O95104 1147 aaKnown RBP6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 OAZ2O95190 189 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 DRD1P21728 446 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 GABRR2P28476 465 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 PTGS2P35354 604 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 P2RY2P41231 377 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 MTNR1BP49286 362 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 MCM2P49736 904 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 RARRES1P49788 294 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 NLRP5P59047 1200 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 SLC25A3Q00325 362 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 LMAN2Q12907 356 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 PRPF4BQ13523 1007 aaKnown RBP6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 NOMO1Q15155 1222 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 TRIP6Q15654 476 aaKnown RBP6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 EARS2Q5JPH6 523 aaKnown RBP6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 NCAPH2Q6IBW4 605 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 CENPPQ6IPU0 288 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 PCSK4Q6UW60 755 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 MAEAQ7L5Y9 396 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 SYT12Q8IV01 421 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 SFTPA1Q8IWL2 248 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 BLIDQ8IZY5 108 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 ZNF276Q8N554 614 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 ATAD1Q8NBU5 361 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 PIGOQ8TEQ8 1089 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 SLC25A43Q8WUT9 341 aaPredicted RBP6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 TFAP2CQ92754 450 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 USP13Q92995 863 aaPredicted RBP6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 PSMG2Q969U7 264 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 FAM20AQ96MK3 541 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 PGLYRP2Q96PD5 576 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 P2RY13Q9BPV8 354 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 EIF2AK1Q9BQI3 630 aaKnown RBP6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 NDC1Q9BTX1 674 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 TASP1Q9H6P5 420 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 MMRN2Q9H8L6 949 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 DMRT3Q9NQL9 472 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 SH3GLB2Q9NR46 395 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 ANKEF1Q9NU02 776 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 DKK4Q9UBT3 224 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 SCOCQ9UIL1 159 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 MAFFQ9ULX9 164 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms