RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 E2F7Q96AV8 911 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 TRIM43Q96BQ3 446 aaPredicted RBP11.27□□□□□ -0.61
SKA2-204ENST00000578519 TSPAN17Q96FV3 270 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 MRGPRX2Q96LB1 330 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 APOL2Q9BQE5 337 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 GORASP1Q9BQQ3 440 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 SIKE1Q9BRV8 207 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 SPON2Q9BUD6 331 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 ZBP1Q9H171 429 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 RHOJQ9H4E5 214 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 CHRAC1Q9NRG0 131 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 PCMTD2Q9NV79 361 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 NDFIP2Q9NV92 336 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 ZMYM5Q9UJ78 669 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 STOML2Q9UJZ1 356 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 RIMKLBQ9ULI2 386 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 MTO1Q9Y2Z2 717 aaKnown RBP11.27□□□□□ -0.61
SKA2-204ENST00000578519 SH3BP1Q9Y3L3 701 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 ZFP37Q9Y6Q3 630 aaPredicted RBP11.27□□□□□ -0.61
SKA2-204ENST00000578519 FNDC1Q4ZHG4 1894 aaPredicted RBP11.27□□□□□ -0.61
SKA2-204ENST00000578519 MYO16Q9Y6X6 1858 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 TRAV19A0A0A6YYK7 116 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 H0Y626 953 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 J3KR12 359 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 HNRNPCL1O60812 293 aaKnown RBP11.26□□□□□ -0.61
SKA2-204ENST00000578519 SIN3BO75182 1162 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 GJB5O95377 273 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 CRTAMO95727 393 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 PEX11BO96011 259 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 F11P03951 625 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 CYBBP04839 570 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 ETV4P43268 484 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 RASSF2P50749 326 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 HTRA4P83105 476 aaPredicted RBP11.26□□□□□ -0.61
SKA2-204ENST00000578519 SMAD3P84022 425 aaKnown RBP11.26□□□□□ -0.61
SKA2-204ENST00000578519 TMPRSS15P98073 1019 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 UBE3AQ05086 875 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 SLC10A7Q0GE19 358 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 STX3Q13277 289 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 POU6F1Q14863 301 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 PCSK7Q16549 785 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 ARHGAP15Q53QZ3 475 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 SPDYAQ5MJ70 313 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 TSTD2Q5T7W7 516 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 FAM47EQ6ZV65 393 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 OTOP2Q7RTS6 562 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 GALNT7Q86SF2 657 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 CRLF3Q8IUI8 442 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 CNTN4Q8IWV2 1026 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 LEMD2Q8NC56 503 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 RDH11Q8TC12 318 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 PPP4R1Q8TF05 950 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 ISL2Q96A47 359 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 MFSD3Q96ES6 412 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 TMA16Q96EY4 203 aaKnown RBP11.26□□□□□ -0.61
SKA2-204ENST00000578519 FCRL3Q96P31 734 aaPredicted RBP11.26□□□□□ -0.61
SKA2-204ENST00000578519 RAD9AQ99638 391 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 MUC3BQ9H195 1237 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 TRPC7Q9HCX4 862 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 ATP13A1Q9HD20 1204 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 PIH1D1Q9NWS0 290 aaKnown RBP11.26□□□□□ -0.61
SKA2-204ENST00000578519 SLC17A7Q9P2U7 560 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 ZNF212Q9UDV6 495 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 PRDM4Q9UKN5 801 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 AGO1Q9UL18 857 aaKnown RBP11.26□□□□□ -0.61
SKA2-204ENST00000578519 TBC1D30Q9Y2I9 924 aa11.26□□□□□ -0.61
SKA2-204ENST00000578519 VWA8A3KMH1 1905 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 MICAL3Q7RTP6 2002 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 A0A087X1B8 175 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 CXorf51AA0A1B0GTR3 108 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 LOC285095A0A1B0GVY8 99 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 WDR91A4D1P6 747 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 MYO1CO00159 1063 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 TPP1O14773 563 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 TEX28O15482 410 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 SLC7A4O43246 635 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 UGT1A9O60656 530 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 LILRB3O75022 631 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 PIAS1O75925 651 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 FSBPO95073 299 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 SNUPNO95149 360 aaKnown RBP11.25□□□□□ -0.61
SKA2-204ENST00000578519 NDST3O95803 873 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 BPGMP07738 259 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 ACRP10323 421 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 IRF1P10914 325 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 HSPA8P11142 646 aaKnown RBP11.25□□□□□ -0.61
SKA2-204ENST00000578519 NMBRP28336 390 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 MAPK8P45983 427 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 CD151P48509 253 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 PRAMEP78395 509 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 SLC12A1Q13621 1099 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 TSNAXIP1Q2TAA8 658 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 MPPE1Q53F39 396 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 INO80DQ53TQ3 878 aaPredicted RBP11.25□□□□□ -0.61
SKA2-204ENST00000578519 FAM133BQ5BKY9 247 aaKnown RBP11.25□□□□□ -0.61
SKA2-204ENST00000578519 MPP7Q5T2T1 576 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 ARTNQ5T4W7 220 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 ALG1LQ6GMV1 187 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 DENND5AQ6IQ26 1287 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 NEPROQ6NW34 567 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms