RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 PLK4O00444 970 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 FGF10O15520 208 aaPredicted RBP14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 THEGLP0DJG4 465 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 GLDCP23378 1020 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 MAT2AP31153 395 aaKnown RBP14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 KLK7P49862 253 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 GRM3Q14832 879 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 C15orf59Q2T9L4 293 aaPredicted RBP14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 PROX2Q3B8N5 592 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 EFHC2Q5JST6 749 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 FBXL19Q6PCT2 694 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 LINGO4Q6UY18 593 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 IRF2BP2Q7Z5L9 587 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 GATAD2AQ86YP4 633 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 PSTKQ8IV42 348 aaKnown RBP14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 FAM181AQ8N9Y4 354 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 JOSD2Q8TAC2 188 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 SLC30A5Q8TAD4 765 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 FNIP1Q8TF40 1166 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 VOPP1Q96AW1 172 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 AGPAT1Q99943 283 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 NCAPGQ9BPX3 1015 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 SLC17A9Q9BYT1 436 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 CPEB1Q9BZB8 566 aaKnown RBP14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 EDEM3Q9BZQ6 932 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 CATSPERBQ9H7T0 1116 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 NCKIPSDQ9NZQ3 722 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 ZFR2Q9UPR6 939 aaKnown RBP14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 GPSM3Q9Y4H4 160 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 CSNK1G3Q9Y6M4 447 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 PTPRQQ9UMZ3 2332 aa14.75□□□□□ -0.05
SMARCE1-213ENST00000578044 LOC400499M0QZD8 3231 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 A0A087WV48 116 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 NEMP2A6NFY4 417 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 FAM72CH0Y354 149 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 AREL1O15033 823 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 LZTS3O60299 673 aaPredicted RBP14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 GP1BAP07359 652 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 GZMAP12544 262 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 ATP1A3P13637 1013 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 CDK11BP21127 795 aaKnown RBP14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 RABIFP47224 123 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 HNRNPKP61978 463 aaKnown RBP eCLIP14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 IL9RQ01113 521 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 RAD51Q06609 339 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 BNIP3Q12983 259 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 RTP5Q14D33 572 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 CDO1Q16878 200 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 FAM72AQ5TYM5 149 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 ACAD10Q6JQN1 1059 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 FAM72DQ6L9T8 149 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 FAM72BQ86X60 149 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 DRC7Q8IY82 874 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 EID2Q8N6I1 236 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 EPAS1Q99814 870 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 DUSP23Q9BVJ7 150 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 TNKS2Q9H2K2 1166 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 NDFIP2Q9NV92 336 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 EVA1BQ9NVM1 165 aa14.74□□□□□ -0.05
SMARCE1-213ENST00000578044 BPTFQ12830 3046 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 SPTY2D1-AS1A0A0U1RR47 76 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 A0A1W2PQC6 194 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 TRABD2BA6NFA1 517 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 C16orf96A6NNT2 1141 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 SLC31A1O15431 190 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 BNIP3LO60238 219 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 PIAS2O75928 621 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 PCDH8O95206 1070 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 DGKAP23743 735 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 ACVRL1P37023 503 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 NDST2P52849 883 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 MYLK3Q32MK0 819 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 HS1BP3Q53T59 392 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 RWDD4Q6NW29 188 aaKnown RBP14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 DNAJC24Q6P3W2 148 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 DHRS13Q6UX07 377 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 GCNT7Q6ZNI0 430 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 PARS2Q7L3T8 475 aaKnown RBP14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 MCOLN2Q8IZK6 566 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 SLC25A45Q8N413 288 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 CCDC185Q8N715 623 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 GRIN3AQ8TCU5 1115 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 NXPE2Q96DL1 559 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 GDAP1L1Q96MZ0 367 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 TTYH3Q9C0H2 523 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 NOL6Q9H6R4 1146 aaKnown RBP14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 RTN4Q9NQC3 1192 aaKnown RBP14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 PARVAQ9NVD7 372 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 NLGN3Q9NZ94 848 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 AIPL1Q9NZN9 384 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 FZD10Q9ULW2 581 aa14.73□□□□□ -0.05
SMARCE1-213ENST00000578044 SMTNL1A8MU46 457 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 TPP1O14773 563 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 SCAMP1O15126 338 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 CSF2P04141 144 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 ALPPL2P10696 532 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 CKMT1AP12532 417 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 NME1P15531 152 aaKnown RBP14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 EPHB2P29323 1055 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 PRKCIP41743 596 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms