RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 CCDC114Q96M63 670 aa7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 RPRD1AQ96P16 312 aaPredicted RBP7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 MED15Q96RN5 788 aa7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 FAM117AQ9C073 453 aa7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 MUC3BQ9H195 1237 aa7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 CAAP1Q9H8G2 361 aa7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 FAM204AQ9H8W3 233 aa7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 USP29Q9HBJ7 922 aa7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 NLGN3Q9NZ94 848 aa7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 VPS28Q9UK41 221 aa7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 SATB2Q9UPW6 733 aa7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 HPSEQ9Y251 543 aa7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 HEMK1Q9Y5R4 338 aaPredicted RBP7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 ASXL3Q9C0F0 2248 aa7.03□□□□□ -1.28
SMARCE1-212ENST00000577721 DSPP15924 2871 aaKnown RBP7.02□□□□□ -1.28
SMARCE1-212ENST00000577721 LAMA5O15230 3695 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 TCAF2A6NFQ2 919 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 A6NNZ2 444 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 K7ESM1 405 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 SCAMP1O15126 338 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 ALOX15BO15296 676 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 SLC16A3O15427 465 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 ENDOD1O94919 500 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 ZNF202O95125 648 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 GP1BAP07359 652 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 SLC2A3P11169 496 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 CCR1P32246 355 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 CHRNA3P32297 505 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 PRCPP42785 496 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 RECQLP46063 649 aaPredicted RBP7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 FMO5P49326 533 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 TAS2R38P59533 333 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 YWHAZP63104 245 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 KRT83P78385 493 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 KRT85P78386 507 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 NFATC3Q12968 1075 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 PKP1Q13835 747 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 ISXQ2M1V0 245 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 ZNF284Q2VY69 593 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 CCDC40Q4G0X9 1142 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 PIP5KL1Q5T9C9 394 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 TTC39BQ5VTQ0 682 aaPredicted RBP7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 ANKRD40Q6AI12 368 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 OR6B2Q6IFH4 312 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 FBXL22Q6P050 247 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 DENND1BQ6P3S1 775 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 CRTC1Q6UUV9 634 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 C20orf204Q6ZNR8 217 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 EFL1Q7Z2Z2 1120 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 DCP2Q8IU60 420 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 ARL14Q8N4G2 192 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 UBR7Q8N806 425 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 TMEM145Q8NBT3 493 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 LMX1AQ8TE12 382 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 TTC9Q92623 222 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 KAT5Q92993 513 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 ARRDC3Q96B67 414 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 ATXN7L3BQ96GX2 97 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 SLC46A1Q96NT5 459 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 NOX5Q96PH1 765 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 ZSWIM1Q9BR11 485 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 FEM1AQ9BSK4 669 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 SIK2Q9H0K1 926 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 SYNDIG1Q9H7V2 258 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 POPDC2Q9HBU9 364 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 METTL14Q9HCE5 456 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 RMND1Q9NWS8 449 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 DDIT4Q9NX09 232 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 VANGL2Q9ULK5 521 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 APC2O95996 2303 aa7.02□□□□□ -1.29
SMARCE1-212ENST00000577721 E5RJQ4 531 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 K7ENP7 123 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 MUSKO15146 869 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 MED7O43513 233 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 TNFSF15O95150 251 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 LETM1O95202 739 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 PAK4O96013 591 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 MT-CO1P00395 513 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 PRNPP04156 253 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 RHOCP08134 193 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 GIMD1P0DJR0 217 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 TGM2P21980 687 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 GPD2P43304 727 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 DNA2P51530 1060 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 PITX1P78337 314 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 NME3Q13232 169 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 SGCGQ13326 291 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 PNOCQ13519 176 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 AUHQ13825 339 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 NR0B2Q15466 257 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 DEFB133Q30KQ1 61 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 SEL1L3Q68CR1 1132 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 CXorf57Q6NSI4 855 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 ZCCHC8Q6NZY4 707 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 GUSBP11Q6P575 273 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 INO80CQ6PI98 192 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 GCNT7Q6ZNI0 430 aa7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 RBM44Q6ZP01 1051 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-212ENST00000577721 ERN2Q76MJ5 926 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms