RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 CCNYQ8ND76 341 aa15.44■□□□□ 0.06
LITAF-217ENST00000575426 EXD1Q8NHP7 514 aa15.44■□□□□ 0.06
LITAF-217ENST00000575426 PIGKQ92643 395 aa15.44■□□□□ 0.06
LITAF-217ENST00000575426 ZNF419Q96HQ0 510 aaPredicted RBP15.44■□□□□ 0.06
LITAF-217ENST00000575426 HSPA12BQ96MM6 686 aa15.44■□□□□ 0.06
LITAF-217ENST00000575426 OSBPL1AQ9BXW6 950 aa15.44■□□□□ 0.06
LITAF-217ENST00000575426 PCED1AQ9H1Q7 454 aa15.44■□□□□ 0.06
LITAF-217ENST00000575426 HAUS2Q9NVX0 235 aa15.44■□□□□ 0.06
LITAF-217ENST00000575426 SEPT3Q9UH03 358 aa15.44■□□□□ 0.06
LITAF-217ENST00000575426 EVLQ9UI08 416 aaPredicted RBP15.44■□□□□ 0.06
LITAF-217ENST00000575426 PCDHA3Q9Y5H8 950 aa15.44■□□□□ 0.06
LITAF-217ENST00000575426 HEY1Q9Y5J3 304 aa15.44■□□□□ 0.06
LITAF-217ENST00000575426 WASF2Q9Y6W5 498 aa15.44■□□□□ 0.06
LITAF-217ENST00000575426 ZFHX2Q9C0A1 2572 aaPredicted RBP15.44■□□□□ 0.06
LITAF-217ENST00000575426 TBC1D3DA0A087WVF3 549 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 TBC1D3IA0A087WXS9 549 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 TBC1D3EA0A087X179 549 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 TBC1D3KA0A087X1G2 549 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 A0A0U1RQJ8 604 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 BCLAF3A2AJT9 711 aaKnown RBP15.43■□□□□ 0.06
LITAF-217ENST00000575426 TBC1D3FA6NER0 549 aaPredicted RBP15.43■□□□□ 0.06
LITAF-217ENST00000575426 METTL12A8MUP2 240 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 TBC1D3LB9A6J9 549 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 SLC7A4O43246 635 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 MAFKO60675 156 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 LRP3O75074 770 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 TBC1D3HP0C7X1 549 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 CCNCP24863 283 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 CTNNA2P26232 953 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 DRD3P35462 400 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 HSPA9P38646 679 aaKnown RBP15.43■□□□□ 0.06
LITAF-217ENST00000575426 GARSP41250 739 aaKnown RBP15.43■□□□□ 0.06
LITAF-217ENST00000575426 CDKN2BP42772 138 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 PTGER3P43115 390 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 RWDD2BP57060 319 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 COPS2P61201 443 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 DYNLT1P63172 113 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 SPEM2Q0P670 501 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 GALNT2Q10471 571 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 CNTN1Q12860 1018 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 MARC1Q5VT66 337 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 SLC9A4Q6AI14 798 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 TBC1D3GQ6DHY5 549 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 TBC1D3CQ6IPX1 549 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 NT5DC3Q86UY8 548 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 TBC1D3Q8IZP1 549 aaPredicted RBP15.43■□□□□ 0.06
LITAF-217ENST00000575426 LRRC57Q8N9N7 239 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 OR6K2Q8NGY2 324 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 KRT35Q92764 455 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 EXOC2Q96KP1 924 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 KDM4CQ9H3R0 1056 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 LHX3Q9UBR4 397 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 SERGEFQ9UGK8 458 aa15.43■□□□□ 0.06
LITAF-217ENST00000575426 DOCK9Q9BZ29 2069 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 MIF4GDA9UHW6 222 aaKnown RBP15.42■□□□□ 0.06
LITAF-217ENST00000575426 PLK4O00444 970 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 CST8O60676 142 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 FSBPO95073 299 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 MAP3K6O95382 1288 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 UGT2B4P06133 528 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 ITGB7P26010 798 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 GKP32189 559 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 MPLP40238 635 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 GBE1Q04446 702 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 NSUN2Q08J23 767 aaKnown RBP eCLIP15.42■□□□□ 0.06
LITAF-217ENST00000575426 SLC10A7Q0GE19 358 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 ZNF805Q5CZA5 627 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 CFAP58Q5T655 872 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 DCAF12L1Q5VU92 463 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 FBXL19Q6PCT2 694 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 GDPD4Q6W3E5 623 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 ERN2Q76MJ5 926 aaKnown RBP15.42■□□□□ 0.06
LITAF-217ENST00000575426 SRLQ86TD4 932 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 SYT12Q8IV01 421 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 SLC41A1Q8IVJ1 513 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 DCLK2Q8N568 766 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 PAF1Q8N7H5 531 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 PLD5Q8N7P1 536 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 TSEN2Q8NCE0 465 aaKnown RBP15.42■□□□□ 0.06
LITAF-217ENST00000575426 OR2T34Q8NGX1 318 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 UBE2Q2Q8WVN8 375 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 SNX19Q92543 992 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 ARRDC3Q96B67 414 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 KLHL32Q96NJ5 620 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 HDAC8Q9BY41 377 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 CPEB1Q9BZB8 566 aaKnown RBP15.42■□□□□ 0.06
LITAF-217ENST00000575426 LZTFL1Q9NQ48 299 aa15.42■□□□□ 0.06
LITAF-217ENST00000575426 TRPM6Q9BX84 2022 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 PPP1R12AO14974 1030 aaPredicted RBP15.41■□□□□ 0.06
LITAF-217ENST00000575426 MATN3O15232 486 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 FTCDO95954 541 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 KRT10P13645 584 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 GNSP15586 552 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 XPAP23025 273 aaPredicted RBP15.41■□□□□ 0.06
LITAF-217ENST00000575426 ITPKAP23677 461 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 MMP13P45452 471 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 CSNK1DP48730 415 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 MARCKSL1P49006 195 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 NR2C2P49116 596 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 SCNN1BP51168 640 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms