RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 SLC17A9Q9BYT1 436 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 RETREG1Q9H6L5 497 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 UCKL1Q9NWZ5 548 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 NEU3Q9UQ49 428 aa21.5■■□□□ 1.03
CHRNB1-206ENST00000574054 ANKRD62A6NC57 917 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 GOLGA6L22H0YM25 854 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 NEMP1O14524 444 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 GSCP56915 257 aaPredicted RBP21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 DAB2P98082 770 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 TARDBPQ13148 414 aaKnown RBP eCLIP21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 ZNF211Q13398 564 aaPredicted RBP21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 ILKQ13418 452 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 PROX2Q3B8N5 592 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 SCYL2Q6P3W7 929 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 ABI3BPQ7Z7G0 1075 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 SLFN11Q7Z7L1 901 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 PYROXD2Q8N2H3 581 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 NTAN1Q96AB6 310 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 AGPAT1Q99943 283 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 CAAP1Q9H8G2 361 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 DNAJC28Q9NX36 388 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 TRPM6Q9BX84 2022 aa21.49■■□□□ 1.03
CHRNB1-206ENST00000574054 SIGLEC16A6NMB1 481 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 C16orf96A6NNT2 1141 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 CCP110O43303 1012 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 BUB1O43683 1085 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 AP1G1O43747 822 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 PAK4O96013 591 aaPredicted RBP21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 UGT2B4P06133 528 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 SNRPD1P62314 119 aaKnown RBP21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 SGCGQ13326 291 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 FGL2Q14314 439 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 ZNF542PQ5EBM4 170 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 EFHC2Q5JST6 749 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 ATXN7L2Q5T6C5 722 aaPredicted RBP21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 MON1BQ7L1V2 547 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 PLPP6Q8IY26 295 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 SLC22A18ASQ8N1D0 253 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 OR4C6Q8NH72 309 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 MCEEQ96PE7 176 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 ITM2BQ9Y287 266 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 LOC400499M0QZD8 3231 aa21.48■■□□□ 1.03
CHRNB1-206ENST00000574054 IGSF10Q6WRI0 2623 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 CXorf51AA0A1B0GTR3 108 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 POM121BA6NF01 834 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 IGLON5A6NGN9 336 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 RAD51BO15315 384 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 PIAS2O75928 621 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 GSRP00390 522 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 HOXB3P14651 431 aaPredicted RBP21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 ACP1P24666 158 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 EPHB2P29323 1055 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 C1QBPQ07021 282 aaKnown RBP21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 MYLK3Q32MK0 819 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 ZNF805Q5CZA5 627 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 KYAT3Q6YP21 454 aaKnown RBP21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 TMC6Q7Z403 805 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 PDZD3Q86UT5 571 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 OR2AP1Q8NGE2 309 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 ERGIC2Q96RQ1 377 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 HS3ST3A1Q9Y663 406 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 AK5Q9Y6K8 562 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 ADAMTS20P59510 1910 aa21.47■■□□□ 1.03
CHRNB1-206ENST00000574054 ZSCAN5CA6NGD5 496 aaPredicted RBP21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 TSPAN6O43657 245 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 KDELR3O43731 214 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 CREB3O43889 395 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 TMCC1O94876 653 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 POP4O95707 220 aaKnown RBP21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 ALPPL2P10696 532 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 ABL2P42684 1182 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 ZNF143P52747 638 aaPredicted RBP21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 DCP2Q8IU60 420 aaKnown RBP21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 AOPEPQ8N6M6 819 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 RTL3Q8N8U3 475 aaKnown RBP21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 FAM174AQ8TBP5 190 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 RAB7BQ96AH8 199 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 LRIG1Q96JA1 1093 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 BMFQ96LC9 184 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 GDAP1L1Q96MZ0 367 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 KLHL32Q96NJ5 620 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 DCBLD2Q96PD2 775 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 EPAS1Q99814 870 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 OSBPL1AQ9BXW6 950 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 IPO11Q9UI26 975 aaKnown RBP21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 GGT7Q9UJ14 662 aa21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 TDRD6O60522 2096 aaKnown RBP21.46■■□□□ 1.03
CHRNB1-206ENST00000574054 FPGTO14772 594 aa21.45■■□□□ 1.02
CHRNB1-206ENST00000574054 RPL7AP62424 266 aaKnown RBP21.45■■□□□ 1.02
CHRNB1-206ENST00000574054 SEMG2Q02383 582 aa21.45■■□□□ 1.02
CHRNB1-206ENST00000574054 LRRC73Q5JTD7 316 aa21.45■■□□□ 1.02
CHRNB1-206ENST00000574054 CCDC183Q5T5S1 534 aa21.45■■□□□ 1.02
CHRNB1-206ENST00000574054 DCUN1D2Q6PH85 259 aa21.45■■□□□ 1.02
CHRNB1-206ENST00000574054 ZSCAN30Q86W11 494 aa21.45■■□□□ 1.02
CHRNB1-206ENST00000574054 NETO2Q8NC67 525 aa21.45■■□□□ 1.02
CHRNB1-206ENST00000574054 IFT43Q96FT9 208 aa21.45■■□□□ 1.02
CHRNB1-206ENST00000574054 CNPY3Q9BT09 278 aa21.45■■□□□ 1.02
CHRNB1-206ENST00000574054 KLC2Q9H0B6 622 aa21.45■■□□□ 1.02
CHRNB1-206ENST00000574054 SCUBE2Q9NQ36 999 aa21.45■■□□□ 1.02
CHRNB1-206ENST00000574054 FZD10Q9ULW2 581 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms