RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 NETO2Q8NC67 525 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 CHST14Q8NCH0 376 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 CADM4Q8NFZ8 388 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 KRT35Q92764 455 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 P3H4Q92791 437 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 FATE1Q969F0 183 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 HDAC11Q96DB2 347 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 TSGA13Q96PP4 275 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 HINFPQ9BQA5 517 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 DUSP15Q9H1R2 295 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 DTLQ9NZJ0 730 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 MBD1Q9UIS9 605 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 TPX2Q9ULW0 747 aaKnown RBP12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 EFR3BQ9Y2G0 817 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 PCDHGA5Q9Y5G8 931 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 CAPN6Q9Y6Q1 641 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 hCG_1818297A0A087WSY0 165 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 GOLGA6L9A6NEM1 432 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 MATN3O15232 486 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 TJP3O95049 919 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 SEMA4FO95754 770 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 CTSLP07711 333 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 RETP07949 1114 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 BCKDHBP21953 392 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 ITGB7P26010 798 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 MSNP26038 577 aaKnown RBP12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 PTPN7P35236 360 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 PLA2G5P39877 138 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 MMP13P45452 471 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 PEX5P50542 639 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 GBE1Q04446 702 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 RALGPS1Q5JS13 557 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 WDR45BQ5MNZ6 344 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 CFAP58Q5T655 872 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 ATXN7L2Q5T6C5 722 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 TP53INP2Q8IXH6 220 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 CCDC13Q8IYE1 715 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 FRMD1Q8N878 549 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 RUBCNQ92622 972 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 HES6Q96HZ4 224 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 PSKH2Q96QS6 385 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 TUBGCP5Q96RT8 1024 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 FERMT1Q9BQL6 677 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 GPR174Q9BXC1 333 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 CPEB1Q9BZB8 566 aaKnown RBP12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 NEUROG2Q9H2A3 272 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 KDM4CQ9H3R0 1056 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 CD93Q9NPY3 652 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 LHX3Q9UBR4 397 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 AMACRQ9UHK6 382 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 SARDHQ9UL12 918 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 WASF2Q9Y6W5 498 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 NUMA1Q14980 2115 aa12.95□□□□□ -0.34
TRAPPC1-206ENST00000573989 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 PRR23AA6NEV1 266 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 MEI4A8MW99 385 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 APOC4-APOC2K7ER74 178 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 EPN2O95208 641 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 MAP3K6O95382 1288 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 APOC2P02655 101 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 KRT10P13645 584 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 CES1P23141 567 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 SCNN1BP51168 640 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 NEK3P51956 506 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 AP1S1P61966 158 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 PPIDQ08752 370 aaKnown RBP12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 SLC10A7Q0GE19 358 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 AP1B1Q10567 949 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 CNTN1Q12860 1018 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 SLC10A2Q12908 348 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 POM121L1PQ3SYA9 428 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 ZNF805Q5CZA5 627 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 SEL1L2Q5TEA6 688 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 LYSMD4Q5XG99 296 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 FBXL19Q6PCT2 694 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 GDPD4Q6W3E5 623 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 ERN2Q76MJ5 926 aaKnown RBP12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 CYP2U1Q7Z449 544 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 SRLQ86TD4 932 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 TMEFF1Q8IYR6 380 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 AADATQ8N5Z0 425 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 PAF1Q8N7H5 531 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 TSEN2Q8NCE0 465 aaKnown RBP12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 OR2T34Q8NGX1 318 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 OR6K2Q8NGY2 324 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 OR14C36Q8NHC7 312 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 HCAR2Q8TDS4 363 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 ZNF419Q96HQ0 510 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 EXOC2Q96KP1 924 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 ZNF641Q96N77 438 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 PHOX2BQ99453 314 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 HDAC8Q9BY41 377 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 OSBPL8Q9BZF1 889 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 POLR1EQ9GZS1 481 aaKnown RBP12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 ATP13A3Q9H7F0 1226 aa12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 EVLQ9UI08 416 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC1-206ENST00000573989 PACSIN2Q9UNF0 486 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms