RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 FNIP1Q8TF40 1166 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 HMCESQ96FZ2 354 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 LRRC19Q9H756 370 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 GPR27Q9NS67 375 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 PARVAQ9NVD7 372 aa17.73■□□□□ 0.43
SMG6-214ENST00000573827 HECAQ9UBI9 543 aaPredicted RBP17.73■□□□□ 0.43
SMG6-214ENST00000573827 AP1G1O43747 822 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 FTLP02792 175 aaPredicted RBP17.72■□□□□ 0.43
SMG6-214ENST00000573827 SKILP12757 684 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 ABL2P42684 1182 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 RECQLP46063 649 aaPredicted RBP17.72■□□□□ 0.43
SMG6-214ENST00000573827 NEK3P51956 506 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 FANCCQ00597 558 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 SERINC3Q13530 473 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 PPP1R2P3Q6NXS1 205 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 GCNT7Q6ZNI0 430 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 OR2AP1Q8NGE2 309 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 OR6K2Q8NGY2 324 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 KLK6Q92876 244 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 SKA1Q96BD8 255 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 ISCUQ9H1K1 167 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 CAAP1Q9H8G2 361 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 PDFQ9HBH1 243 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 GPATCH2LQ9NWQ4 482 aa17.72■□□□□ 0.43
SMG6-214ENST00000573827 APOBEC2Q9Y235 224 aaKnown RBP17.72■□□□□ 0.43
SMG6-214ENST00000573827 ANKRD62A6NC57 917 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 RASA4BC9J798 803 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 SLC31A1O15431 190 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 RASA4O43374 803 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 TNFSF14O43557 240 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 CREB3O43889 395 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 TMCC1O94876 653 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 DNA2P51530 1060 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 GEMIN4P57678 1058 aaKnown RBP17.71■□□□□ 0.43
SMG6-214ENST00000573827 YBEYP58557 167 aaPredicted RBP17.71■□□□□ 0.43
SMG6-214ENST00000573827 BNIP3Q12983 259 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 MYLK3Q32MK0 819 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 INO80DQ53TQ3 878 aaPredicted RBP17.71■□□□□ 0.43
SMG6-214ENST00000573827 ATXN7L2Q5T6C5 722 aaPredicted RBP17.71■□□□□ 0.43
SMG6-214ENST00000573827 CCNI2Q6ZMN8 369 aaPredicted RBP17.71■□□□□ 0.43
SMG6-214ENST00000573827 ABI3BPQ7Z7G0 1075 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 SLC22A18ASQ8N1D0 253 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 NETO2Q8NC67 525 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 PPP1R16AQ96I34 528 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 LRIG1Q96JA1 1093 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 EPAS1Q99814 870 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 FZD3Q9NPG1 666 aa17.71■□□□□ 0.43
SMG6-214ENST00000573827 A0A1W2PQJ5 194 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 ZSCAN5CA6NGD5 496 aaPredicted RBP17.7■□□□□ 0.42
SMG6-214ENST00000573827 C16orf96A6NNT2 1141 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 AREL1O15033 823 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 RAD51BO15315 384 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 YKT6O15498 198 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 FGF10O15520 208 aaPredicted RBP17.7■□□□□ 0.42
SMG6-214ENST00000573827 PSMA2P25787 234 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 HTR7P34969 479 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 KLHL30Q0D2K2 578 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 CCDC15Q0P6D6 951 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 PARP15Q460N3 678 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 SLC45A4Q5BKX6 768 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 ZNF805Q5CZA5 627 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 AFMIDQ63HM1 303 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 TMPRSS7Q7RTY8 843 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 TSC1Q92574 1164 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 KCTD15Q96SI1 283 aaPredicted RBP17.7■□□□□ 0.42
SMG6-214ENST00000573827 KLF6Q99612 283 aaPredicted RBP17.7■□□□□ 0.42
SMG6-214ENST00000573827 SNRNP25Q9BV90 132 aaKnown RBP17.7■□□□□ 0.42
SMG6-214ENST00000573827 C1QTNF2Q9BXJ5 285 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 ZDHHC6Q9H6R6 413 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 DYRK4Q9NR20 520 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 LHX3Q9UBR4 397 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 CNOT8Q9UFF9 292 aaKnown RBP17.7■□□□□ 0.42
SMG6-214ENST00000573827 GGT7Q9UJ14 662 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 AP4E1Q9UPM8 1137 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 MFHAS1Q9Y4C4 1052 aa17.7■□□□□ 0.42
SMG6-214ENST00000573827 TMEM8BA6NDV4 472 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 BUB1O43683 1085 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 LRCH4O75427 683 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 POP4O95707 220 aaKnown RBP17.69■□□□□ 0.42
SMG6-214ENST00000573827 SERPINC1P01008 464 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 HNRNPA2B1P22626 353 aaKnown RBP17.69■□□□□ 0.42
SMG6-214ENST00000573827 MIPP30301 263 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 ARRB1P49407 418 aaPredicted RBP17.69■□□□□ 0.42
SMG6-214ENST00000573827 STAT4Q14765 748 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 CYTH1Q15438 398 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 ARHGAP12Q8IWW6 846 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 OXR1Q8N573 874 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 OR13H1Q8NG92 308 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 CASKIN2Q8WXE0 1202 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 SYN2Q92777 582 aaPredicted RBP17.69■□□□□ 0.42
SMG6-214ENST00000573827 BMFQ96LC9 184 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 MYOCQ99972 504 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 CATSPERBQ9H7T0 1116 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 ZMIZ1Q9ULJ6 1067 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 HPCAL4Q9UM19 191 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 NENFQ9UMX5 172 aa17.69■□□□□ 0.42
SMG6-214ENST00000573827 SMG1Q96Q15 3661 aaKnown RBP17.68■□□□□ 0.42
SMG6-214ENST00000573827 EIF3CLB5ME19 914 aaKnown RBP17.68■□□□□ 0.42
SMG6-214ENST00000573827 LOC400499M0QZD8 3231 aa17.68■□□□□ 0.42
SMG6-214ENST00000573827 TAF4O00268 1085 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms