RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 HNRNPKP61978 463 aaKnown RBP eCLIP22.37■■□□□ 1.17
SNF8-216ENST00000573795 ATP11AP98196 1134 aa22.37■■□□□ 1.17
SNF8-216ENST00000573795 NRG1Q02297 640 aaPredicted RBP22.37■■□□□ 1.17
SNF8-216ENST00000573795 C15orf59Q2T9L4 293 aaPredicted RBP22.37■■□□□ 1.17
SNF8-216ENST00000573795 OR6K2Q8NGY2 324 aa22.37■■□□□ 1.17
SNF8-216ENST00000573795 SLC39A7Q92504 469 aa22.37■■□□□ 1.17
SNF8-216ENST00000573795 ISG20Q96AZ6 181 aaKnown RBP22.37■■□□□ 1.17
SNF8-216ENST00000573795 FEM1CQ96JP0 617 aa22.37■■□□□ 1.17
SNF8-216ENST00000573795 LENG8Q96PV6 779 aaPredicted RBP22.37■■□□□ 1.17
SNF8-216ENST00000573795 C1QTNF2Q9BXJ5 285 aa22.37■■□□□ 1.17
SNF8-216ENST00000573795 CLSTN2Q9H4D0 955 aa22.37■■□□□ 1.17
SNF8-216ENST00000573795 SAMSN1Q9NSI8 373 aaKnown RBP22.37■■□□□ 1.17
SNF8-216ENST00000573795 HECAQ9UBI9 543 aaPredicted RBP22.37■■□□□ 1.17
SNF8-216ENST00000573795 ITM2BQ9Y287 266 aa22.37■■□□□ 1.17
SNF8-216ENST00000573795 CXorf51AA0A1B0GTR3 108 aa22.36■■□□□ 1.17
SNF8-216ENST00000573795 FAM72CH0Y354 149 aa22.36■■□□□ 1.17
SNF8-216ENST00000573795 LZTS3O60299 673 aaPredicted RBP22.36■■□□□ 1.17
SNF8-216ENST00000573795 MPOP05164 745 aa22.36■■□□□ 1.17
SNF8-216ENST00000573795 ERCC5P28715 1186 aaPredicted RBP22.36■■□□□ 1.17
SNF8-216ENST00000573795 FAM72AQ5TYM5 149 aa22.36■■□□□ 1.17
SNF8-216ENST00000573795 FAM72DQ6L9T8 149 aa22.36■■□□□ 1.17
SNF8-216ENST00000573795 PCSK4Q6UW60 755 aa22.36■■□□□ 1.17
SNF8-216ENST00000573795 PARGQ86W56 976 aa22.36■■□□□ 1.17
SNF8-216ENST00000573795 FAM72BQ86X60 149 aa22.36■■□□□ 1.17
SNF8-216ENST00000573795 PLPP6Q8IY26 295 aa22.36■■□□□ 1.17
SNF8-216ENST00000573795 ARHGEF2Q92974 986 aaKnown RBP22.36■■□□□ 1.17
SNF8-216ENST00000573795 HIC2Q96JB3 615 aa22.36■■□□□ 1.17
SNF8-216ENST00000573795 STK33Q9BYT3 514 aa22.36■■□□□ 1.17
SNF8-216ENST00000573795 GANQ9H2C0 597 aa22.36■■□□□ 1.17
SNF8-216ENST00000573795 NEMP2A6NFY4 417 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 IGLON5A6NGN9 336 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 C16orf96A6NNT2 1141 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 TK2O00142 265 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 CSO75390 466 aaKnown RBP22.35■■□□□ 1.17
SNF8-216ENST00000573795 GJB6O95452 261 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 CYP1A1P04798 512 aaPredicted RBP22.35■■□□□ 1.17
SNF8-216ENST00000573795 CHRNB2P17787 502 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 ADRA1BP35368 520 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 RABIFP47224 123 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 PFN3P60673 137 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 CDO1Q16878 200 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 CCDC14Q49A88 953 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 MSANTD4Q8NCY6 345 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 JOSD2Q8TAC2 188 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 IFI44Q8TCB0 444 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 RXFP2Q8WXD0 754 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 DEPDC7Q96QD5 511 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 DUSP23Q9BVJ7 150 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 USP29Q9HBJ7 922 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 OR12D3Q9UGF7 316 aa22.35■■□□□ 1.17
SNF8-216ENST00000573795 PNMA8BQ9ULN7 279 aaPredicted RBP22.35■■□□□ 1.17
SNF8-216ENST00000573795 RP1P56715 2156 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 DXOO77932 396 aaKnown RBP22.34■■□□□ 1.17
SNF8-216ENST00000573795 RHOQP17081 205 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 MMP8P22894 467 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 MAPKAPK2P49137 400 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 GABREP78334 506 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 FMO1Q01740 532 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 EIF2B5Q13144 721 aaKnown RBP22.34■■□□□ 1.17
SNF8-216ENST00000573795 PDE1CQ14123 709 aaPredicted RBP22.34■■□□□ 1.17
SNF8-216ENST00000573795 PHLDB2Q86SQ0 1253 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 ZSCAN30Q86W11 494 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 ASB12Q8WXK4 309 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 ZNF578Q96N58 590 aaPredicted RBP22.34■■□□□ 1.17
SNF8-216ENST00000573795 OSBPL2Q9H1P3 480 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 TMEM248Q9NWD8 314 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 DNAI1Q9UI46 699 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 CSNK1G3Q9Y6M4 447 aa22.34■■□□□ 1.17
SNF8-216ENST00000573795 SETXQ7Z333 2677 aaKnown RBP22.34■■□□□ 1.17
SNF8-216ENST00000573795 A0A1W2PNU3 283 aaPredicted RBP22.33■■□□□ 1.17
SNF8-216ENST00000573795 C2CD4BA6NLJ0 364 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 FPGTO14772 594 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 TSPAN6O43657 245 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 USP12O75317 370 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 LRIG2O94898 1065 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 GSRP00390 522 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 TGM2P21980 687 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 KLK7P49862 253 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 ZNF805Q5CZA5 627 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 TCP11X2Q5H9J9 407 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 ZCCHC8Q6NZY4 707 aaKnown RBP22.33■■□□□ 1.17
SNF8-216ENST00000573795 GUSBP11Q6P575 273 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 LEKR1Q6ZMV7 388 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 GPR155Q7Z3F1 870 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 CCDC185Q8N715 623 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 ZNF248Q8NDW4 579 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 DENND6BQ8NEG7 585 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 OR2AP1Q8NGE2 309 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 GPT2Q8TD30 523 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 RAB7BQ96AH8 199 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 TCEAL2Q9H3H9 227 aaPredicted RBP22.33■■□□□ 1.17
SNF8-216ENST00000573795 ASCL3Q9NQ33 180 aa22.33■■□□□ 1.17
SNF8-216ENST00000573795 LRRK1Q38SD2 2015 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 TEX51A0A1B0GUA7 166 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 PES1O00541 588 aaKnown RBP22.32■■□□□ 1.16
SNF8-216ENST00000573795 AREL1O15033 823 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 AQP9O43315 295 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 UGT2B4P06133 528 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 ETFBP38117 255 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 LSSP48449 732 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms