RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TRIM11Q96F44 468 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 EIF3CQ99613 913 aaKnown RBP17.61■□□□□ 0.41
SMG6-212ENST00000573153 SNRNP25Q9BV90 132 aaKnown RBP17.61■□□□□ 0.41
SMG6-212ENST00000573153 ERVMER34-1Q9H9K5 563 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 LHX3Q9UBR4 397 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 GGT7Q9UJ14 662 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 CAPN11Q9UMQ6 739 aa17.61■□□□□ 0.41
SMG6-212ENST00000573153 FARP1Q9Y4F1 1045 aaPredicted RBP17.61■□□□□ 0.41
SMG6-212ENST00000573153 ARID1BQ8NFD5 2236 aaPredicted RBP17.61■□□□□ 0.41
SMG6-212ENST00000573153 TMCC1O94876 653 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 MYBL1P10243 752 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 GRK6P43250 576 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 NEK3P51956 506 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 C21orf59P57076 290 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 GEMIN4P57678 1058 aaKnown RBP17.6■□□□□ 0.41
SMG6-212ENST00000573153 BNIP3Q12983 259 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 SERINC3Q13530 473 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 POLD3Q15054 466 aaPredicted RBP17.6■□□□□ 0.41
SMG6-212ENST00000573153 ATXN7L2Q5T6C5 722 aaPredicted RBP17.6■□□□□ 0.41
SMG6-212ENST00000573153 AFMIDQ63HM1 303 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 SCYL2Q6P3W7 929 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 ADAT2Q7Z6V5 191 aaKnown RBP17.6■□□□□ 0.41
SMG6-212ENST00000573153 PRPF39Q86UA1 669 aaKnown RBP17.6■□□□□ 0.41
SMG6-212ENST00000573153 ARHGAP12Q8IWW6 846 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 SLC22A18ASQ8N1D0 253 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 OR2AP1Q8NGE2 309 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 RHBDD1Q8TEB9 315 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 KLK6Q92876 244 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 KCTD15Q96SI1 283 aaPredicted RBP17.6■□□□□ 0.41
SMG6-212ENST00000573153 KLF6Q99612 283 aaPredicted RBP17.6■□□□□ 0.41
SMG6-212ENST00000573153 FZD3Q9NPG1 666 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 HECAQ9UBI9 543 aaPredicted RBP17.6■□□□□ 0.41
SMG6-212ENST00000573153 SCINQ9Y6U3 715 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 CFAP47Q6ZTR5 3102 aa17.6■□□□□ 0.41
SMG6-212ENST00000573153 RASA4BC9J798 803 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 PRAMEF26H0Y7S4 382 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 RAD51BO15315 384 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 RASA4O43374 803 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 AP1G1O43747 822 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 DFNA5O60443 496 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 LRCH4O75427 683 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 GIMD1P0DJR0 217 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 TCF4P15884 667 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 IL1R2P27930 398 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 SETMARQ53H47 684 aaPredicted RBP17.59■□□□□ 0.41
SMG6-212ENST00000573153 KDM7AQ6ZMT4 941 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 ABI3BPQ7Z7G0 1075 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 NPWQ8N729 165 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 EPAS1Q99814 870 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 GDF3Q9NR23 364 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 AP4E1Q9UPM8 1137 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 ITM2BQ9Y287 266 aa17.59■□□□□ 0.41
SMG6-212ENST00000573153 DMXL2Q8TDJ6 3036 aa17.58■□□□□ 0.41
SMG6-212ENST00000573153 ZSCAN5CA6NGD5 496 aaPredicted RBP17.58■□□□□ 0.4
SMG6-212ENST00000573153 AREL1O15033 823 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 SLC31A1O15431 190 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 FGF10O15520 208 aaPredicted RBP17.58■□□□□ 0.4
SMG6-212ENST00000573153 CREB3O43889 395 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 GYPCP04921 128 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 SERPING1P05155 500 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 PSMA2P25787 234 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 MIPP30301 263 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 HNRNPH3P31942 346 aaKnown RBP17.58■□□□□ 0.4
SMG6-212ENST00000573153 YBEYP58557 167 aaPredicted RBP17.58■□□□□ 0.4
SMG6-212ENST00000573153 CCDC15Q0P6D6 951 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 OVGP1Q12889 678 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 CYTH1Q15438 398 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 TPRG1LQ5T0D9 272 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 PSTKQ8IV42 348 aaKnown RBP17.58■□□□□ 0.4
SMG6-212ENST00000573153 OR13H1Q8NG92 308 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 TSC1Q92574 1164 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 BMFQ96LC9 184 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 NSMCE3Q96MG7 304 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 CDC6Q99741 560 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 MYOCQ99972 504 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 NCAPGQ9BPX3 1015 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 ZDHHC6Q9H6R6 413 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 IFNKQ9P0W0 207 aa17.58■□□□□ 0.4
SMG6-212ENST00000573153 CNOT8Q9UFF9 292 aaKnown RBP17.58■□□□□ 0.4
SMG6-212ENST00000573153 C16orf96A6NNT2 1141 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 TAF4O00268 1085 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 INSIG1O15503 277 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 TNFSF14O43557 240 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 RECQLP46063 649 aaPredicted RBP17.57■□□□□ 0.4
SMG6-212ENST00000573153 CLDN2P57739 230 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 SUZ12Q15022 739 aaKnown RBP17.57■□□□□ 0.4
SMG6-212ENST00000573153 ACAP1Q15027 740 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 MYLK3Q32MK0 819 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 PARP15Q460N3 678 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 INO80DQ53TQ3 878 aaPredicted RBP17.57■□□□□ 0.4
SMG6-212ENST00000573153 CCNI2Q6ZMN8 369 aaPredicted RBP17.57■□□□□ 0.4
SMG6-212ENST00000573153 TMPRSS7Q7RTY8 843 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 VPS36Q86VN1 386 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 MARCH9Q86YJ5 346 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 TP53INP2Q8IXH6 220 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 CASKIN2Q8WXE0 1202 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 ZNF653Q96CK0 615 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 PPP1R16AQ96I34 528 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 LRIG1Q96JA1 1093 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 C1QTNF2Q9BXJ5 285 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms