RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 GJB2P29033 226 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 CSKP41240 450 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 CTSOP43234 321 aaPredicted RBP7.09□□□□□ -1.27
CHD3-213ENST00000571249 MMP16P51512 607 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 SGSHP51688 502 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 PGDP52209 483 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 PMS2P54278 862 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 SLC12A3P55017 1021 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 TAS2R38P59533 333 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 CNTN1Q12860 1018 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 ADAM9Q13443 819 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 POSTNQ15063 836 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 ZNF284Q2VY69 593 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 ZNF394Q53GI3 561 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 PRRT3Q5FWE3 981 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 AGBL4Q5VU57 503 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 SLC6A19Q695T7 634 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 JAZF1Q86VZ6 243 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 FUKQ8N0W3 1084 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 IGSF22Q8N9C0 903 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 KDM1BQ8NB78 822 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 NOC3LQ8WTT2 800 aaKnown RBP7.09□□□□□ -1.27
CHD3-213ENST00000571249 KIAA1143Q96AT1 154 aaPredicted RBP7.09□□□□□ -1.27
CHD3-213ENST00000571249 HDAC11Q96DB2 347 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 ARSGQ96EG1 525 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 HAPLN3Q96S86 360 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 REEP2Q9BRK0 252 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 MMTAG2Q9BU76 263 aaKnown RBP7.09□□□□□ -1.27
CHD3-213ENST00000571249 RAB34Q9BZG1 259 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 SPRY4Q9C004 299 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 ZHX3Q9H4I2 956 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 RDH14Q9HBH5 336 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 MRPL40Q9NQ50 206 aaKnown RBP7.09□□□□□ -1.27
CHD3-213ENST00000571249 SEMA3GQ9NS98 782 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 INTS13Q9NVM9 706 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 KCND2Q9NZV8 630 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 SPASTQ9UBP0 616 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 SLCO3A1Q9UIG8 710 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 ERVW-1Q9UQF0 538 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 MTMR6Q9Y217 621 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 PCDHB3Q9Y5E6 796 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 ATP6V1DQ9Y5K8 247 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 LMO7DNF2Z398 122 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 PRPF6O94906 941 aaKnown RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 CCDC130P13994 396 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 FDPSP14324 419 aaKnown RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 HOXB1P14653 301 aaPredicted RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 RECQLP46063 649 aaPredicted RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 ITGA1P56199 1179 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 PER3P56645 1201 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 TNNC1P63316 161 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 HMGN5P82970 282 aaKnown RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 MC1RQ01726 317 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 ORC2Q13416 577 aaPredicted RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 ART3Q13508 389 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 PDE1CQ14123 709 aaPredicted RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 ELAVL3Q14576 367 aaKnown RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 ZNF630Q2M218 657 aaPredicted RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 WDR72Q3MJ13 1102 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 MCTP1Q6DN14 999 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 FJX1Q86VR8 437 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 HORMAD1Q86X24 394 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 ZGRF1Q86YA3 2104 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 CCNJLQ8IV13 435 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 SFTPA2Q8IWL1 248 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 NLGN4XQ8N0W4 816 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 RBMXL3Q8N7X1 1067 aaKnown RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 C4orf32Q8N8J7 132 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 ARL10Q8N8L6 244 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 NECAB1Q8N987 351 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 NLGN4YQ8NFZ3 816 aaPredicted RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 SLC2A14Q8TDB8 520 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 BTN2A2Q8WVV5 523 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 HVCN1Q96D96 273 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 LMLNQ96KR4 655 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 FIZ1Q96SL8 496 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 LRRC61Q9BV99 259 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 PARVGQ9HBI0 331 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 CSNK1G1Q9HCP0 422 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 GPR27Q9NS67 375 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 AKAP7Q9P0M2 348 aaPredicted RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 MARCH2Q9P0N8 246 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 RCOR3Q9P2K3 495 aaPredicted RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 DMGDHQ9UI17 866 aaKnown RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 INTS6Q9UL03 887 aaKnown RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 ODF2LQ9ULJ1 636 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 STRIP2Q9ULQ0 834 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 PCDHGB7Q9Y5F8 929 aa7.08□□□□□ -1.28
CHD3-213ENST00000571249 KLF2Q9Y5W3 355 aaPredicted RBP7.08□□□□□ -1.28
CHD3-213ENST00000571249 CDC14CA4D256 554 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 C19orf84I3L1E1 186 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 RAD51BO15315 384 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 KCNAB3O43448 404 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 TBL1XO60907 577 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 CTDNEP1O95476 244 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 MBD3O95983 291 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 CST3P01034 146 aaPredicted RBP7.07□□□□□ -1.28
CHD3-213ENST00000571249 SRPRAP08240 638 aaKnown RBP7.07□□□□□ -1.28
CHD3-213ENST00000571249 TSHRP16473 764 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 ABCD1P33897 745 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms