RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	CCNH	P51946	323 aa	Predicted RBP	11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	PDX1	P52945	283 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	ADK	P55263	362 aa	Known RBP	11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	RNASE9	P60153	205 aa	Known RBP	11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	SLC6A3	Q01959	620 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	NFATC3	Q12968	1075 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	CARD16	Q5EG05	197 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	LRRC31	Q6UY01	552 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	SLC26A9	Q7LBE3	791 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	CLEC14A	Q86T13	490 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	TPCN2	Q8NHX9	752 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	GRAMD1A	Q96CP6	724 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	NPY6R	Q99463	290 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	HEPH	Q9BQS7	1158 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	C1QTNF2	Q9BXJ5	285 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	TM6SF2	Q9BZW4	377 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	ZDHHC6	Q9H6R6	413 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	SYNC	Q9H7C4	482 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	ARHGEF38	Q9NXL2	777 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	SPAST	Q9UBP0	616 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	APOBEC3B	Q9UH17	382 aa	Known RBP	11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	GGT7	Q9UJ14	662 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	ITM2B	Q9Y287	266 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	FCF1	Q9Y324	198 aa	Known RBP	11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	ACTL7A	Q9Y615	435 aa		11.21	□□□□□ -0.61
CMC2-223	ENST00000570195	CCDC187	A0A096LP49	1063 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	FAM170A	A1A519	330 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	DRGX	A6NNA5	263 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	NEMP1	O14524	444 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	TPP1	O14773	563 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	EFS	O43281	561 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	AP1G1	O43747	822 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	SRGAP2	O75044	1071 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	ZMPSTE24	O75844	475 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	SLC9A1	P19634	815 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	BMP6	P22004	513 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	GK	P32189	559 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	PPP1R2	P41236	205 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	RPIA	P49247	311 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	SERPINH1	P50454	418 aa	Known RBP	11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	THOP1	P52888	689 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	PFN3	P60673	137 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	ARF5	P84085	180 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	DEUP1	Q05D60	604 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	SPIDR	Q14159	915 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	PTPN20	Q4JDL3	420 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	PRRT3	Q5FWE3	981 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	BRMS1L	Q5PSV4	323 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	RETSAT	Q6NUM9	610 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	ENOSF1	Q7L5Y1	443 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	PHACTR4	Q8IZ21	702 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	RYBP	Q8N488	228 aa	Predicted RBP	11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	PCDH20	Q8N6Y1	951 aa	Known RBP	11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	EXD3	Q8N9H8	876 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	OR6K2	Q8NGY2	324 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	BTN2A2	Q8WVV5	523 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	GLMN	Q92990	594 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	NAT6	Q93015	286 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	LENG8	Q96PV6	779 aa	Predicted RBP	11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	CCNL2	Q96S94	520 aa	Predicted RBP	11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	CCDC3	Q9BQI4	270 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	BOC	Q9BWV1	1114 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	SRRT	Q9BXP5	876 aa	Known RBP	11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	CEP44	Q9C0F1	390 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	ATP13A1	Q9HD20	1204 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	PLCB1	Q9NQ66	1216 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	HOOK1	Q9UJC3	728 aa	Known RBP	11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	PCDHGC3	Q9UN70	934 aa		11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.2	□□□□□ -0.62
CMC2-223	ENST00000570195	BICDL2	A1A5D9	508 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	ILVBL	A1L0T0	632 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	C16orf96	A6NNT2	1141 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	BIN1	O00499	593 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	YY2	O15391	372 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	TSPAN6	O43657	245 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	GNA14	O95837	355 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	ANXA6	P08133	673 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	CELA2B	P08218	269 aa	Predicted RBP	11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	ITGA2B	P08514	1039 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	MARS	P56192	900 aa	Known RBP	11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	NFKB2	Q00653	900 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	SRSF6	Q13247	344 aa	Known RBP	11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	TCEA2	Q15560	299 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	TGIF1	Q15583	401 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	ARL13B	Q3SXY8	428 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	C6orf132	Q5T0Z8	1188 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	TRIM65	Q6PJ69	517 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	B3GNT8	Q7Z7M8	397 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	VPS36	Q86VN1	386 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	JAML	Q86YT9	394 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	DRC7	Q8IY82	874 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	DENND6B	Q8NEG7	585 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	ZNF397	Q8NF99	534 aa	Predicted RBP	11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	TBCB	Q99426	244 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	LRRC61	Q9BV99	259 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	FAM117A	Q9C073	453 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	CLPB	Q9H078	707 aa		11.19	□□□□□ -0.62
CMC2-223	ENST00000570195	EPB41L5	Q9HCM4	733 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms