RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 MTERF2Q49AM1 385 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 BHLHB9Q6PI77 547 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 UTP15Q8TED0 518 aaKnown RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 ATG4AQ8WYN0 398 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 HTRA1Q92743 480 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 CGRRF1Q99675 332 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 NDFIP2Q9NV92 336 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 MTMR10Q9NXD2 777 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 RCOR3Q9P2K3 495 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 TRIM64A6NGJ6 449 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 TRIM64BA6NI03 449 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 AP3D1O14617 1153 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SLC30A4O14863 429 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 GABBR2O75899 941 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 ANGPTL1O95841 491 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 PRKACBP22694 351 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 HNMTP50135 292 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 RFTN1Q14699 578 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 GALNTL6Q49A17 601 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 DUS1LQ6P1R4 473 aaKnown RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 DCP2Q8IU60 420 aaKnown RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SH3RF3Q8TEJ3 882 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SPIRE2Q8WWL2 714 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SNX27Q96L92 541 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 EBNA1BP2Q99848 306 aaKnown RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 ACTR6Q9GZN1 396 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 CYP4F12Q9HCS2 524 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 OSGEPQ9NPF4 335 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 NECTIN3Q9NQS3 549 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 EXD2Q9NVH0 621 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 MADDQ8WXG6 1647 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 LOC100506127A0A0U1RQW1 187 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 G3V2T6 193 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 I3L521 148 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 DDX3YO15523 660 aaKnown RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 LTA4HP09960 611 aaKnown RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 NPR2P20594 1047 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 AMPD1P23109 780 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 PEX2P28328 305 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 SULT1E1P49888 294 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 AQP4P55087 323 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 ZNF543Q08ER8 600 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 ANKRD26P1Q6NSI1 321 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 CHCHD4Q8N4Q1 142 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 LPCAT1Q8NF37 534 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 C1QTNF1Q9BXJ1 281 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 POLR3FQ9H1D9 316 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 REXO2Q9Y3B8 237 aaKnown RBP7.18□□□□□ -1.26
CNOT1-216ENST00000569240 HSPE1-MOB4S4R3N1 261 aa7.18□□□□□ -1.26
CNOT1-216ENST00000569240 C2orf81A6NN90 581 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 NPPAP01160 153 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ITGB3P05106 788 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 S100A3P33764 101 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 CYP4F2P78329 520 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 CYP4F3Q08477 520 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 SMCO1Q147U7 214 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 GPALPP1Q8IXQ4 340 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 DNAJA4Q8WW22 397 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 FIG4Q92562 907 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 RCN3Q96D15 328 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 FAM193BQ96PV7 902 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ADAMTS10Q9H324 1103 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 WWOXQ9NZC7 414 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 INVSQ9Y283 1065 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 PCDHB12Q9Y5F1 795 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 GAKO14976 1311 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 BCKDKO14874 412 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 TEX28O15482 410 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 HPRP00739 348 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 CLTBP09497 229 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 PLIN5Q00G26 463 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 PRKCEQ02156 737 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 TTLL12Q14166 644 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ACOX1Q15067 660 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 PTGES3Q15185 160 aaKnown RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 QRICH1Q2TAL8 776 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 CYP4V2Q6ZWL3 525 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 KCNMB4Q86W47 210 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 FBXO39Q8N4B4 442 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 FLAD1Q8NFF5 587 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 AURKBQ96GD4 344 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 GSDMCQ9BYG8 508 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 COA1Q9GZY4 146 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 STUB1Q9UNE7 303 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 MYO3AQ8NEV4 1616 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ZFYVE16Q7Z3T8 1539 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 A0A0J9YVX5 310 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ABCB7O75027 752 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 RRM1P23921 792 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 RORCP51449 518 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 DGCR6Q14129 220 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 SCARA5Q6ZMJ2 495 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 DENND5BQ6ZUT9 1274 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 DSELQ8IZU8 1212 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 NUSAP1Q9BXS6 441 aaKnown RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 XPNPEP3Q9NQH7 507 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 DNAJB9Q9UBS3 223 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ZNF70Q9UC06 446 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 LINC00854A0A1B0GVQ3 168 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms