RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 NENFQ9UMX5 172 aa29.88■■■□□ 2.37
RAB40C-211ENST00000568586 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.88■■■□□ 2.375e-6■■■■□ 23
RAB40C-211ENST00000568586 FRYQ5TBA9 3013 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 A0A1W2PQU0 124 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 TMCC1O94876 653 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 TRIM16O95361 564 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 TPM3P06753 285 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 ADRB3P13945 408 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 TMEM259Q4ZIN3 620 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 AFMIDQ63HM1 303 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 KCTD15Q96SI1 283 aaPredicted RBP29.87■■■□□ 2.37
RAB40C-211ENST00000568586 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP29.87■■■□□ 2.37
RAB40C-211ENST00000568586 GDF3Q9NR23 364 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 MYO1AQ9UBC5 1043 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 MFHAS1Q9Y4C4 1052 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 PCDHB9Q9Y5E1 797 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 TMEM131Q92545 1883 aa29.87■■■□□ 2.37
RAB40C-211ENST00000568586 SPEGQ15772 3267 aa29.86■■■□□ 2.37
RAB40C-211ENST00000568586 EEF2KO00418 725 aaKnown RBP29.86■■■□□ 2.37
RAB40C-211ENST00000568586 CYP1A2P05177 515 aa29.86■■■□□ 2.37
RAB40C-211ENST00000568586 CASP14P31944 242 aa29.86■■■□□ 2.37
RAB40C-211ENST00000568586 ZNF805Q5CZA5 627 aa29.86■■■□□ 2.37
RAB40C-211ENST00000568586 LEKR1Q6ZMV7 388 aa29.86■■■□□ 2.37
RAB40C-211ENST00000568586 RFX8Q6ZV50 586 aa29.86■■■□□ 2.37
RAB40C-211ENST00000568586 NIPA2Q8N8Q9 360 aa29.86■■■□□ 2.37
RAB40C-211ENST00000568586 OSBPL1AQ9BXW6 950 aa29.86■■■□□ 2.37
RAB40C-211ENST00000568586 ZDHHC6Q9H6R6 413 aa29.86■■■□□ 2.37
RAB40C-211ENST00000568586 PDFQ9HBH1 243 aa29.86■■■□□ 2.37
RAB40C-211ENST00000568586 ZFR2Q9UPR6 939 aaKnown RBP29.86■■■□□ 2.37
RAB40C-211ENST00000568586 FADS3Q9Y5Q0 445 aa29.86■■■□□ 2.37
RAB40C-211ENST00000568586 DOCK9Q9BZ29 2069 aa29.85■■■□□ 2.37
RAB40C-211ENST00000568586 RXRGP48443 463 aa29.85■■■□□ 2.37
RAB40C-211ENST00000568586 FOXC1Q12948 553 aa29.85■■■□□ 2.37
RAB40C-211ENST00000568586 SHBQ15464 509 aa29.85■■■□□ 2.37
RAB40C-211ENST00000568586 PARS2Q7L3T8 475 aaKnown RBP29.85■■■□□ 2.37
RAB40C-211ENST00000568586 ZSCAN30Q86W11 494 aa29.85■■■□□ 2.37
RAB40C-211ENST00000568586 SETD7Q8WTS6 366 aaKnown RBP29.85■■■□□ 2.37
RAB40C-211ENST00000568586 RAB7BQ96AH8 199 aa29.85■■■□□ 2.37
RAB40C-211ENST00000568586 CDC6Q99741 560 aa29.85■■■□□ 2.37
RAB40C-211ENST00000568586 THAP2Q9H0W7 228 aa29.85■■■□□ 2.37
RAB40C-211ENST00000568586 MAP1BP46821 2468 aaKnown RBP29.85■■■□□ 2.37
RAB40C-211ENST00000568586 YKT6O15498 198 aa29.84■■■□□ 2.37
RAB40C-211ENST00000568586 MAGEC1O60732 1142 aa29.84■■■□□ 2.37
RAB40C-211ENST00000568586 PIGHQ14442 188 aaPredicted RBP29.84■■■□□ 2.37
RAB40C-211ENST00000568586 STAT4Q14765 748 aa29.84■■■□□ 2.37
RAB40C-211ENST00000568586 BOLA3Q53S33 107 aa29.84■■■□□ 2.37
RAB40C-211ENST00000568586 ALKBH5Q6P6C2 394 aaKnown RBP29.84■■■□□ 2.37
RAB40C-211ENST00000568586 FBXL19Q6PCT2 694 aa29.84■■■□□ 2.37
RAB40C-211ENST00000568586 SPATS2Q86XZ4 545 aaKnown RBP29.84■■■□□ 2.37
RAB40C-211ENST00000568586 GDAP1L1Q96MZ0 367 aa29.84■■■□□ 2.37
RAB40C-211ENST00000568586 BTBD3Q9Y2F9 522 aa29.84■■■□□ 2.37
RAB40C-211ENST00000568586 FAM221BA6H8Z2 402 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 C16orf96A6NNT2 1141 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 PRAMEF11O60813 436 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 TOP3BO95985 862 aaKnown RBP29.83■■■□□ 2.37
RAB40C-211ENST00000568586 IL1R2P27930 398 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 GKP32189 559 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 GRK6P43250 576 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 CYTH1Q15438 398 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 DPYSL2Q16555 572 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 KIAA1161Q6NSJ0 714 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 ZNF354CQ86Y25 554 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 OR6K2Q8NGY2 324 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 RHBDD1Q8TEB9 315 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 SLC39A8Q9C0K1 460 aa29.83■■■□□ 2.37
RAB40C-211ENST00000568586 CWC15Q9P013 229 aaKnown RBP29.83■■■□□ 2.37
RAB40C-211ENST00000568586 AKAP13Q12802 2813 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 KRIT1O00522 736 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 CBFA2T2O43439 604 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 DKK1O94907 266 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 ERCC2P18074 760 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 RPS21P63220 83 aaKnown RBP29.82■■■□□ 2.36
RAB40C-211ENST00000568586 DPYSQ14117 519 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 ATXN7L2Q5T6C5 722 aaPredicted RBP29.82■■■□□ 2.36
RAB40C-211ENST00000568586 SPECC1LQ69YQ0 1117 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 RAB44Q7Z6P3 723 aaPredicted RBP29.82■■■□□ 2.36
RAB40C-211ENST00000568586 ARHGAP12Q8IWW6 846 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 RYBPQ8N488 228 aaPredicted RBP29.82■■■□□ 2.36
RAB40C-211ENST00000568586 OXR1Q8N573 874 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 SAP25Q8TEE9 199 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 FEM1CQ96JP0 617 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 DNAJC7Q99615 494 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 CPEB1Q9BZB8 566 aaKnown RBP29.82■■■□□ 2.36
RAB40C-211ENST00000568586 TSPY26PQ9H489 355 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 LHX3Q9UBR4 397 aa29.82■■■□□ 2.36
RAB40C-211ENST00000568586 SLC31A1O15431 190 aa29.81■■■□□ 2.36
RAB40C-211ENST00000568586 TSPAN6O43657 245 aa29.81■■■□□ 2.36
RAB40C-211ENST00000568586 PCDH8O95206 1070 aa29.81■■■□□ 2.36
RAB40C-211ENST00000568586 FTH1P19P0C7X4 201 aa29.81■■■□□ 2.36
RAB40C-211ENST00000568586 HNRNPA2B1P22626 353 aaKnown RBP29.81■■■□□ 2.36
RAB40C-211ENST00000568586 TRIM14Q14142 442 aa29.81■■■□□ 2.36
RAB40C-211ENST00000568586 PRAMEF14Q5SWL7 426 aa29.81■■■□□ 2.36
RAB40C-211ENST00000568586 SEL1L3Q68CR1 1132 aa29.81■■■□□ 2.36
RAB40C-211ENST00000568586 ADAMTS14Q8WXS8 1223 aa29.81■■■□□ 2.36
RAB40C-211ENST00000568586 SCNM1Q9BWG6 230 aa29.81■■■□□ 2.36
RAB40C-211ENST00000568586 DKK3Q9UBP4 350 aa29.81■■■□□ 2.36
RAB40C-211ENST00000568586 UBA2Q9UBT2 640 aaPredicted RBP29.81■■■□□ 2.36
RAB40C-211ENST00000568586 IP6K2Q9UHH9 426 aa29.81■■■□□ 2.36
RAB40C-211ENST00000568586 NEUROG3Q9Y4Z2 214 aa29.81■■■□□ 2.36
RAB40C-211ENST00000568586 ASPMQ8IZT6 3477 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 1302 ms