RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 TBC1D3Q8IZP1 549 aaPredicted RBP13.21□□□□□ -0.29
CNOT1-213ENST00000568158 TSEN2Q8NCE0 465 aaKnown RBP13.21□□□□□ -0.29
CNOT1-213ENST00000568158 FOXJ1Q92949 421 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 TCEAL3Q969E4 200 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 BIRC7Q96CA5 298 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 EXOC2Q96KP1 924 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 ZNF670Q9BS34 389 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 VPS45Q9NRW7 570 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 RXFP3Q9NSD7 469 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 DDX56Q9NY93 547 aaKnown RBP13.21□□□□□ -0.29
CNOT1-213ENST00000568158 EIF2B4Q9UI10 523 aaKnown RBP13.21□□□□□ -0.29
CNOT1-213ENST00000568158 FZD4Q9ULV1 537 aa13.21□□□□□ -0.29
CNOT1-213ENST00000568158 FRYLO94915 3013 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 TTC24A2A3L6 582 aaPredicted RBP13.2□□□□□ -0.3
CNOT1-213ENST00000568158 MEI4A8MW99 385 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 MFSD11O43934 449 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 GDF9O60383 454 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 LRP3O75074 770 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 PEX11BO96011 259 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 RGRP47804 291 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 MARCKSL1P49006 195 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 TAS2R38P59533 333 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 IRX4P78413 519 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 GBE1Q04446 702 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 KIF5AQ12840 1032 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 LBRQ14739 615 aaKnown RBP13.2□□□□□ -0.3
CNOT1-213ENST00000568158 ODF2Q5BJF6 829 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 SYCP2LQ5T4T6 812 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 AGBL4Q5VU57 503 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 KIAA0895LQ68EN5 471 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 C11orf63Q6NUN7 778 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 PRR23CQ6ZRP0 262 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 RFX6Q8HWS3 928 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 OR2T34Q8NGX1 318 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 KIAA1524Q8TCG1 905 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 DNASE2BQ8WZ79 361 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 SNX19Q92543 992 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 KRT35Q92764 455 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 FAM131CQ96AQ9 280 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 NSMCE3Q96MG7 304 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 KLHL32Q96NJ5 620 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 MAK16Q9BXY0 300 aaKnown RBP13.2□□□□□ -0.3
CNOT1-213ENST00000568158 MIR1-1HGQ9H1L0 117 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 EBF2Q9HAK2 575 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 FSCN3Q9NQT6 498 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 ADGRG1Q9Y653 693 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 SLCO1B1Q9Y6L6 691 aa13.2□□□□□ -0.3
CNOT1-213ENST00000568158 WDR87Q6ZQQ6 2873 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 MACROD2A1Z1Q3 448 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 GRID2IPA4D2P6 1211 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 LRRC72A6NJI9 287 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 MUSKO15146 869 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 GJB3O75712 270 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 IGSF6O95976 241 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 UGT2B4P06133 528 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 IGHV4-34P06331 123 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 KRT10P13645 584 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 SERPINB6P35237 376 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 ADPRHP54922 357 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 RAD51Q06609 339 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 WDR45BQ5MNZ6 344 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 FAM182AQ5T1J6 154 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 PIP5KL1Q5T9C9 394 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 LCE2DQ5TA82 110 aaPredicted RBP13.19□□□□□ -0.3
CNOT1-213ENST00000568158 KAZNQ674X7 775 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 NPNTQ6UXI9 565 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 GDPD4Q6W3E5 623 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 ERN2Q76MJ5 926 aaKnown RBP13.19□□□□□ -0.3
CNOT1-213ENST00000568158 SRLQ86TD4 932 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 GPR161Q8N6U8 529 aaKnown RBP13.19□□□□□ -0.3
CNOT1-213ENST00000568158 PLD5Q8N7P1 536 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 GDAP1L1Q96MZ0 367 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 DYRK4Q9NR20 520 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 ADAMTS9Q9P2N4 1935 aa13.19□□□□□ -0.3
CNOT1-213ENST00000568158 C16orf96A6NNT2 1141 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 KHNYNO15037 678 aaKnown RBP13.18□□□□□ -0.3
CNOT1-213ENST00000568158 ARHGAP6O43182 974 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 PSTPIP1O43586 416 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 PLRG1O43660 514 aaKnown RBP13.18□□□□□ -0.3
CNOT1-213ENST00000568158 ZRANB2O95218 330 aaKnown RBP eCLIP13.18□□□□□ -0.3
CNOT1-213ENST00000568158 ITIH2P19823 946 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 GARSP41250 739 aaKnown RBP13.18□□□□□ -0.3
CNOT1-213ENST00000568158 CDKN2BP42772 138 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 PPP2CBP62714 309 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 DYNLT1P63172 113 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 PPP2CAP67775 309 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 CCZ1BP86790 482 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 CCZ1P86791 482 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-213ENST00000568158 GALNT2Q10471 571 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 RFTN1Q14699 578 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-213ENST00000568158 DUOXA1Q1HG43 343 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 ZNF805Q5CZA5 627 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 TRIM61Q5EBN2 209 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 PEAR1Q5VY43 1037 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-213ENST00000568158 FBXL19Q6PCT2 694 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 SPOCD1Q6ZMY3 1216 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 B4GALNT4Q76KP1 1039 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 PARS2Q7L3T8 475 aaKnown RBP13.18□□□□□ -0.3
CNOT1-213ENST00000568158 RCOR2Q8IZ40 523 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 PGBD5Q8N414 524 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms