RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 PPP1R16AQ96I34 528 aa21.97■■□□□ 1.11
NME3-210ENST00000567271 CALR3Q96L12 384 aaKnown RBP21.97■■□□□ 1.11
NME3-210ENST00000567271 HDAC8Q9BY41 377 aa21.97■■□□□ 1.11
NME3-210ENST00000567271 KDM4CQ9H3R0 1056 aa21.97■■□□□ 1.11
NME3-210ENST00000567271 GOLPH3Q9H4A6 298 aa21.97■■□□□ 1.11
NME3-210ENST00000567271 DYRK4Q9NR20 520 aa21.97■■□□□ 1.11
NME3-210ENST00000567271 ZNF487B1APH4 448 aa21.96■■□□□ 1.11
NME3-210ENST00000567271 MAFKO60675 156 aa21.96■■□□□ 1.11
NME3-210ENST00000567271 PALMO75781 387 aa21.96■■□□□ 1.11
NME3-210ENST00000567271 IGSF6O95976 241 aa21.96■■□□□ 1.11
NME3-210ENST00000567271 CCDC15Q0P6D6 951 aa21.96■■□□□ 1.11
NME3-210ENST00000567271 RFTN1Q14699 578 aaPredicted RBP21.96■■□□□ 1.11
NME3-210ENST00000567271 DUOXA1Q1HG43 343 aa21.96■■□□□ 1.11
NME3-210ENST00000567271 TRIM61Q5EBN2 209 aa21.96■■□□□ 1.11
NME3-210ENST00000567271 SLC23A3Q6PIS1 610 aa21.96■■□□□ 1.11
NME3-210ENST00000567271 ERN2Q76MJ5 926 aaKnown RBP21.96■■□□□ 1.11
NME3-210ENST00000567271 VSIG1Q86XK7 387 aa21.96■■□□□ 1.11
NME3-210ENST00000567271 ZNF599Q96NL3 588 aa21.96■■□□□ 1.11
NME3-210ENST00000567271 RNF157Q96PX1 679 aa21.96■■□□□ 1.11
NME3-210ENST00000567271 DDX56Q9NY93 547 aaKnown RBP21.96■■□□□ 1.11
NME3-210ENST00000567271 SUSD2Q9UGT4 822 aa21.96■■□□□ 1.11
NME3-210ENST00000567271 EIF2B4Q9UI10 523 aaKnown RBP21.96■■□□□ 1.11
NME3-210ENST00000567271 TBC1D3DA0A087WVF3 549 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 TBC1D3IA0A087WXS9 549 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 TBC1D3EA0A087X179 549 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 TBC1D3KA0A087X1G2 549 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 TBC1D3FA6NER0 549 aaPredicted RBP21.95■■□□□ 1.1
NME3-210ENST00000567271 PRR5-ARHGAP8B1AHC4 643 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 TBC1D3LB9A6J9 549 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 PEX11BO96011 259 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 TBC1D3HP0C7X1 549 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 TNNT1P13805 278 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 GNSP15586 552 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 ITGB7P26010 798 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 TAS2R38P59533 333 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 IRX4P78413 519 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 ARHGAP8P85298 464 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 AASDHQ4L235 1098 aaPredicted RBP21.95■■□□□ 1.1
NME3-210ENST00000567271 TBC1D3GQ6DHY5 549 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 TBC1D3CQ6IPX1 549 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 KIAA1328Q86T90 577 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 LRRC49Q8IUZ0 686 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 TBC1D3Q8IZP1 549 aaPredicted RBP21.95■■□□□ 1.1
NME3-210ENST00000567271 ATPAF2Q8N5M1 289 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 C1orf216Q8TAB5 229 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 SNX19Q92543 992 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 EXOC2Q96KP1 924 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 DESI2Q9BSY9 194 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 MIR1-1HGQ9H1L0 117 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 GRPEL1Q9HAV7 217 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 RXFP3Q9NSD7 469 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 SLC6A14Q9UN76 642 aa21.95■■□□□ 1.1
NME3-210ENST00000567271 INSIG1O15503 277 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 PSTPIP1O43586 416 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 MFSD11O43934 449 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 GDF9O60383 454 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 KRT1P04264 644 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 SERPINF2P08697 491 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 CD27P26842 260 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 CCR5P51681 352 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 RAD51Q06609 339 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 LBRQ14739 615 aaKnown RBP21.94■■□□□ 1.1
NME3-210ENST00000567271 ZNF805Q5CZA5 627 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 TMCO4Q5TGY1 634 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 DAAM2Q86T65 1068 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 TSEN2Q8NCE0 465 aaKnown RBP21.94■■□□□ 1.1
NME3-210ENST00000567271 RNF25Q96BH1 459 aaPredicted RBP21.94■■□□□ 1.1
NME3-210ENST00000567271 ORAI3Q9BRQ5 295 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 CINPQ9BW66 212 aaPredicted RBP21.94■■□□□ 1.1
NME3-210ENST00000567271 NUSAP1Q9BXS6 441 aaKnown RBP21.94■■□□□ 1.1
NME3-210ENST00000567271 OSBPL1AQ9BXW6 950 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 CPEB1Q9BZB8 566 aaKnown RBP21.94■■□□□ 1.1
NME3-210ENST00000567271 CAPN10Q9HC96 672 aa21.94■■□□□ 1.1
NME3-210ENST00000567271 DMXL1Q9Y485 3027 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 A0A1B0GTW7 788 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 LNP1A1A4G5 178 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 GOLGA6L3A6NEY3 463 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 CFIP05156 583 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 UGT2B4P06133 528 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 LAMA1P25391 3075 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 RGRP47804 291 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 CSNK1DP48730 415 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 NEK3P51956 506 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 NAP1L1P55209 391 aaKnown RBP21.93■■□□□ 1.1
NME3-210ENST00000567271 NSUN2Q08J23 767 aaKnown RBP eCLIP21.93■■□□□ 1.1
NME3-210ENST00000567271 SLC10A7Q0GE19 358 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 GALNT2Q10471 571 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 GDPD4Q6W3E5 623 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 PARS2Q7L3T8 475 aaKnown RBP21.93■■□□□ 1.1
NME3-210ENST00000567271 TXLNBQ8N3L3 684 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 ZCCHC9Q8N567 271 aaKnown RBP21.93■■□□□ 1.1
NME3-210ENST00000567271 KLHL32Q96NJ5 620 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 PSKH2Q96QS6 385 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 CEP250Q9BV73 2442 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 PREBQ9HCU5 417 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 SEPT3Q9UH03 358 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 TPX2Q9ULW0 747 aaKnown RBP21.93■■□□□ 1.1
NME3-210ENST00000567271 SLCO1B1Q9Y6L6 691 aa21.93■■□□□ 1.1
NME3-210ENST00000567271 PI4KAP42356 2102 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms