RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 REEP2Q9BRK0 252 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ADAM33Q9BZ11 813 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.29□□□□□ -1.4
CDH13-209ENST00000567109 UBP1Q9NZI7 540 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 DDX20Q9UHI6 824 aaKnown RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 PDE2AO00408 941 aaPredicted RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 PSTPIP1O43586 416 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 SNX4O95219 450 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ARP10275 920 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 CASP1P29466 404 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 PRKAG1P54619 331 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 RAD23AP54725 363 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 STXBP1P61764 594 aaKnown RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 KIAA0408Q6ZU52 694 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 KRT74Q7RTS7 529 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 SLC22A9Q8IVM8 553 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 SPPL2AQ8TCT8 520 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ERP27Q96DN0 273 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 PANX3Q96QZ0 392 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 DCLK3Q9C098 648 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 KIAA1257Q9ULG3 409 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TMEM120BA0PK00 339 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 SNPHO15079 494 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 F9P00740 461 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 EPORP19235 508 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 CCNIQ14094 377 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ZNF268Q14587 947 aaPredicted RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 MFSD10Q14728 455 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 NEK5Q6P3R8 708 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TTC33Q6PID6 262 aaPredicted RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 IKBIPQ70UQ0 350 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 FAM228AQ86W67 206 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 HPS6Q86YV9 775 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 DGCR14Q96DF8 476 aaKnown RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 ZNF558Q96NG5 402 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 MTMR9Q96QG7 549 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 APOL4Q9BPW4 351 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 KCNMB3Q9NPA1 279 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 NECTIN3Q9NQS3 549 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 GDF3Q9NR23 364 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TBCCD1Q9NVR7 557 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 GTF3C4Q9UKN8 822 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TBX20Q9UMR3 447 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 SPATA31C2B4DYI2 1134 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 CD3EAPO15446 510 aaKnown RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 FBXO21O94952 628 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 LGALS2P05162 132 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 SERPINF2P08697 491 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ZNF23P17027 643 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ADSLP30566 484 aaPredicted RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 RPL4P36578 427 aaKnown RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 NAMPTP43490 491 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 RPS6KA3P51812 740 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 COPAP53621 1224 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 PSMD4P55036 377 aaKnown RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 TREML2Q5T2D2 321 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 MFSD7Q6UXD7 560 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 CCDC33Q8N5R6 958 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 VCPIP1Q96JH7 1222 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TARS2Q9BW92 718 aaKnown RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 MAGEE1Q9HCI5 957 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TBC1D3DA0A087WVF3 549 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TBC1D3IA0A087WXS9 549 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TBC1D3EA0A087X179 549 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TBC1D3KA0A087X1G2 549 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 A0A096LPK6 155 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ABHD14A-ACY1A0A1B0GW23 586 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 BCLAF3A2AJT9 711 aaKnown RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 TBC1D3FA6NER0 549 aaPredicted RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 TBC1D3LB9A6J9 549 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 UNC5CO95185 931 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 PLGP00747 810 aaPredicted RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 TBC1D3HP0C7X1 549 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 SLC2A4P14672 509 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 HOXB8P17481 243 aaPredicted RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 PDHA2P29803 388 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 CASRP41180 1078 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 GRB14Q14449 540 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 FAM46CQ5VWP2 391 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TBC1D3GQ6DHY5 549 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TBC1D3CQ6IPX1 549 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 TBC1D3Q8IZP1 549 aaPredicted RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 PNPT1Q8TCS8 783 aaKnown RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 MBOAT7Q96N66 472 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 QRFPRQ96P65 431 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 RBM15Q96T37 977 aaKnown RBP eCLIP6.29□□□□□ -1.4
CDH13-209ENST00000567109 CAB39LQ9H9S4 337 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 DNMT3LQ9UJW3 386 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 VANGL2Q9ULK5 521 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 PCDHB2Q9Y5E7 798 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 USP54Q70EL1 1684 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 C15orf38-AP3S2A0A0A6YYH1 394 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 CCDC154A6NI56 674 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 CACNB4O00305 520 aaPredicted RBP6.29□□□□□ -1.4
CDH13-209ENST00000567109 TIMM44O43615 452 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 PSMD10O75832 226 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 LTFP02788 710 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ITPKBP27987 946 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 ADIGQ0VDE8 80 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms