RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 UTP6Q9NYH9 597 aaKnown RBP11.12□□□□□ -0.63
TCF4-232ENST00000566286 HACD3Q9P035 362 aa11.12□□□□□ -0.63
TCF4-232ENST00000566286 VANGL2Q9ULK5 521 aa11.12□□□□□ -0.63
TCF4-232ENST00000566286 NR2E3Q9Y5X4 410 aa11.12□□□□□ -0.63
TCF4-232ENST00000566286 H3BSA7 217 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 PIGNO95427 931 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 LTFP02788 710 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 FAM163BP0C2L3 166 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ZNF26P17031 533 aaPredicted RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 PCSK6P29122 969 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 GMPRP36959 345 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 GRIA4P48058 902 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 SLC26A2P50443 739 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 CDK9P50750 372 aaKnown RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 ATXN1P54253 815 aaKnown RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 TUBA4AP68366 448 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 COG7P83436 770 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 IRF9Q00978 393 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 MPP3Q13368 585 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 VGLL4Q14135 290 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 PTK2BQ14289 1009 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 TCEA2Q15560 299 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 PTPRNQ16849 979 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 Q3C1V9 767 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ARL13AQ5H913 290 aaPredicted RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 EFCAB12Q6NXP0 572 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ISLR2Q6UXK2 745 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 AMIGO2Q86SJ2 522 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ACOT1Q86TX2 421 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 THNSL2Q86YJ6 484 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 CROCCP3Q8IVE0 287 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ZNF567Q8N184 647 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 CCNYQ8ND76 341 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ZNF668Q96K58 619 aaPredicted RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 KLHL32Q96NJ5 620 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 BIRC8Q96P09 236 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 GPR20Q99678 358 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 NUF2Q9BZD4 464 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ZNF700Q9H0M5 742 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ADARB2Q9NS39 739 aaKnown RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 NSMCE4AQ9NXX6 385 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 SEPT10Q9P0V9 454 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 SUCOQ9UBS9 1254 aaKnown RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 TLK1Q9UKI8 766 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 CITO14578 2027 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ARHGEF37A1IGU5 675 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 MAGEB16A2A368 324 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ERI2A8K979 691 aaKnown RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 TMEM229AB2RXF0 380 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ALG1L2C9J202 215 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ADM5C9JUS6 153 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ZSCAN9O15535 394 aaPredicted RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 GRID2O43424 1007 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 RNASEH2AO75792 299 aaKnown RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 VAPBO95292 243 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 H6PDO95479 791 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 C8BP07358 591 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 GJB1P08034 283 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 USP17L7P0C7H9 530 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 HSPA1AP0DMV8 641 aaKnown RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 HSPA1BP0DMV9 641 aaKnown RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 DNAJB1P25685 340 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 IRS1P35568 1242 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 PSMD8P48556 350 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 EMP3P54852 163 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 LPIN1Q14693 890 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 SMAD1Q15797 465 aaKnown RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 ANO4Q32M45 955 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 MGAT5BQ3V5L5 792 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 C2orf27AQ580R0 203 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 ACBD5Q5T8D3 534 aaPredicted RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 ARHGAP17Q68EM7 881 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 NXNQ6DKJ4 435 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 TRIM74Q86UV6 250 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 TRIM73Q86UV7 250 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 OR52K1Q8NGK4 314 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 RIN3Q8TB24 985 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 USB1Q9BQ65 265 aaKnown RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 TASP1Q9H6P5 420 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 FAM49BQ9NUQ9 324 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 RHBDL2Q9NX52 303 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.11□□□□□ -0.63
TCF4-232ENST00000566286 FZD10Q9ULW2 581 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 MYRFQ9Y2G1 1151 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 MRPS23Q9Y3D9 190 aaKnown RBP11.11□□□□□ -0.63
TCF4-232ENST00000566286 MFHAS1Q9Y4C4 1052 aa11.11□□□□□ -0.63
TCF4-232ENST00000566286 A0A0G2JMZ2 1700 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 ZSWIM8A7E2V4 1837 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 ZCWPW2A0A1B0GU75 182 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 TRPC5OSA6NMA1 111 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 GABBR2O75899 941 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 DDHD2O94830 711 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 AP2A1O95782 977 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 AMHP03971 560 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 IQCF3P0C7M6 154 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 CYP2C9P11712 490 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 YY1P25490 414 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 MSX2P35548 267 aaPredicted RBP11.1□□□□□ -0.63
TCF4-232ENST00000566286 DPP6P42658 865 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 ACADSBP45954 432 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms