RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 DCP2Q8IU60 420 aaKnown RBP8.58□□□□□ -1.04
CDH13-207ENST00000565636 MFN1Q8IWA4 741 aa8.58□□□□□ -1.04
CDH13-207ENST00000565636 UBR7Q8N806 425 aa8.58□□□□□ -1.04
CDH13-207ENST00000565636 HNRNPLLQ8WVV9 542 aaKnown RBP8.58□□□□□ -1.04
CDH13-207ENST00000565636 SEMA4DQ92854 862 aa8.58□□□□□ -1.04
CDH13-207ENST00000565636 FGF11Q92914 225 aa8.58□□□□□ -1.04
CDH13-207ENST00000565636 SLC39A13Q96H72 371 aa8.58□□□□□ -1.04
CDH13-207ENST00000565636 SPATA32Q96LK8 384 aa8.58□□□□□ -1.04
CDH13-207ENST00000565636 TSG101Q99816 390 aa8.58□□□□□ -1.04
CDH13-207ENST00000565636 OMDQ99983 421 aa8.58□□□□□ -1.04
CDH13-207ENST00000565636 PRORYQ9H606 182 aa8.58□□□□□ -1.04
CDH13-207ENST00000565636 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDH13-207ENST00000565636 SLC12A6Q9UHW9 1150 aa8.58□□□□□ -1.04
CDH13-207ENST00000565636 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDH13-207ENST00000565636 CNTN6Q9UQ52 1028 aa8.58□□□□□ -1.04
CDH13-207ENST00000565636 ERVW-1Q9UQF0 538 aa8.58□□□□□ -1.04
CDH13-207ENST00000565636 FLNBO75369 2602 aaKnown RBP8.57□□□□□ -1.04
CDH13-207ENST00000565636 TBL1XO60907 577 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 ZNF202O95125 648 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 LUC7L3O95232 432 aaKnown RBP8.57□□□□□ -1.04
CDH13-207ENST00000565636 GP1BAP07359 652 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 GLI1P08151 1106 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 TRIM49P0CI25 452 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 TRIM49CP0CI26 452 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 SLC8A1P32418 973 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 ACTN2P35609 894 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 TBX4P57082 545 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 SNX16P57768 344 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 ADIGQ0VDE8 80 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 EIF4EBP2Q13542 120 aaPredicted RBP8.57□□□□□ -1.04
CDH13-207ENST00000565636 FAM133BQ5BKY9 247 aaKnown RBP8.57□□□□□ -1.04
CDH13-207ENST00000565636 MS4A13Q5J8X5 152 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 ZNF658Q5TYW1 1059 aaPredicted RBP8.57□□□□□ -1.04
CDH13-207ENST00000565636 SFMBT2Q5VUG0 894 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 NAPEPLDQ6IQ20 393 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 OGFOD2Q6N063 350 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 FBXL19Q6PCT2 694 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 C19orf48Q6RUI8 117 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 FAM124AQ86V42 546 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 TRIM69Q86WT6 500 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 GRAMD1CQ8IYS0 662 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 SPATA20Q8TB22 786 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 SORCS1Q8WY21 1168 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 SNX19Q92543 992 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 LRIG1Q96JA1 1093 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 CNDP2Q96KP4 475 aaKnown RBP8.57□□□□□ -1.04
CDH13-207ENST00000565636 BTN2A3PQ96KV6 586 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 MRGPRX3Q96LB0 322 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 SPAG5Q96R06 1193 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 MED15Q96RN5 788 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 NEUROG2Q9H2A3 272 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 CRIM1Q9NZV1 1036 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 ARMCX3Q9UH62 379 aaPredicted RBP8.57□□□□□ -1.04
CDH13-207ENST00000565636 SFMBT1Q9UHJ3 866 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 HOOK1Q9UJC3 728 aaKnown RBP8.57□□□□□ -1.04
CDH13-207ENST00000565636 BTBD3Q9Y2F9 522 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 CHD5Q8TDI0 1954 aa8.57□□□□□ -1.04
CDH13-207ENST00000565636 PRAMEF26H0Y7S4 382 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 MCF2LO15068 1137 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 TMPRSS2O15393 492 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 MED7O43513 233 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 CD70P32970 193 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 CSKP41240 450 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 ACADVLP49748 655 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 NXPH1P58417 271 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 CDH18Q13634 790 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 GOLGA7BQ2TAP0 167 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 PITRM1Q5JRX3 1037 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 RNF219Q5W0B1 726 aaPredicted RBP8.56□□□□□ -1.04
CDH13-207ENST00000565636 PMF1Q6P1K2 205 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 NCEH1Q6PIU2 408 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 TMEM110Q86TL2 294 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 HSCBQ8IWL3 235 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 SMYD4Q8IYR2 804 aaPredicted RBP8.56□□□□□ -1.04
CDH13-207ENST00000565636 POU5F2Q8N7G0 328 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 DCBLD1Q8N8Z6 715 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 CYB5D2Q8WUJ1 264 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 SNRNP27Q8WVK2 155 aaKnown RBP8.56□□□□□ -1.04
CDH13-207ENST00000565636 ERCC4Q92889 916 aaPredicted RBP8.56□□□□□ -1.04
CDH13-207ENST00000565636 PTPRN2Q92932 1015 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 SLC35C1Q96A29 364 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 DHTKD1Q96HY7 919 aaPredicted RBP8.56□□□□□ -1.04
CDH13-207ENST00000565636 TIGD1Q96MW7 591 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 ZNF578Q96N58 590 aaPredicted RBP8.56□□□□□ -1.04
CDH13-207ENST00000565636 THAP9Q9H5L6 903 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 RETREG1Q9H6L5 497 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 PREBQ9HCU5 417 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 ASNSD1Q9NWL6 643 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 NCKIPSDQ9NZQ3 722 aa8.56□□□□□ -1.04
CDH13-207ENST00000565636 INTS6Q9UL03 887 aaKnown RBP8.56□□□□□ -1.04
CDH13-207ENST00000565636 ASH1LQ9NR48 2969 aaKnown RBP8.56□□□□□ -1.04
CDH13-207ENST00000565636 SETXQ7Z333 2677 aaKnown RBP8.55□□□□□ -1.04
CDH13-207ENST00000565636 NEMP2A6NFY4 417 aa8.55□□□□□ -1.04
CDH13-207ENST00000565636 PLRG1O43660 514 aaKnown RBP8.55□□□□□ -1.04
CDH13-207ENST00000565636 RNASEH2AO75792 299 aaKnown RBP8.55□□□□□ -1.04
CDH13-207ENST00000565636 SMC2O95347 1197 aa8.55□□□□□ -1.04
CDH13-207ENST00000565636 GNA14O95837 355 aa8.55□□□□□ -1.04
CDH13-207ENST00000565636 APOEP02649 317 aa8.55□□□□□ -1.04
CDH13-207ENST00000565636 GSTP1P09211 210 aaKnown RBP8.55□□□□□ -1.04
CDH13-207ENST00000565636 CD19P15391 556 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms