RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 PRELID2Q8N945 189 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 HMGB4Q8WW32 186 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 HTR3CQ8WXA8 447 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 CINPQ9BW66 212 aaPredicted RBP12.65□□□□□ -0.38
KARS-204ENST00000564578 POLMQ9NP87 494 aaPredicted RBP12.65□□□□□ -0.38
KARS-204ENST00000564578 CD93Q9NPY3 652 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 EBF1Q9UH73 591 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 ATP8A1Q9Y2Q0 1164 aa12.65□□□□□ -0.38
KARS-204ENST00000564578 BCLAF3A2AJT9 711 aaKnown RBP12.64□□□□□ -0.39
KARS-204ENST00000564578 H7C0C1 242 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 APBB3O95704 486 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 HLA-DQB2P05538 268 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 PTPN3P26045 913 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 CASQ1P31415 396 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 CHRNA3P32297 505 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 ATP5OP48047 213 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 RPS14P62263 151 aaKnown RBP12.64□□□□□ -0.39
KARS-204ENST00000564578 SNRPD1P62314 119 aaKnown RBP12.64□□□□□ -0.39
KARS-204ENST00000564578 CCNG2Q16589 344 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 TEX44Q53QW1 395 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 ALG1LQ6GMV1 187 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 CACUL1Q86Y37 369 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 NSMCE1Q8WV22 266 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 NKD2Q969F2 451 aaPredicted RBP12.64□□□□□ -0.39
KARS-204ENST00000564578 GDAP1L1Q96MZ0 367 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 NT5MQ9NPB1 228 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 EVLQ9UI08 416 aaPredicted RBP12.64□□□□□ -0.39
KARS-204ENST00000564578 MUC6Q6W4X9 2439 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 PGRMC1O00264 195 aaKnown RBP12.64□□□□□ -0.39
KARS-204ENST00000564578 ALOX15BO15296 676 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 LEFTY1O75610 366 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 POP4O95707 220 aaKnown RBP12.64□□□□□ -0.39
KARS-204ENST00000564578 CSNK1DP48730 415 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 SCNN1BP51168 640 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 GDF10P55107 478 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 CSTF1Q05048 431 aaKnown RBP12.64□□□□□ -0.39
KARS-204ENST00000564578 BYSLQ13895 437 aaKnown RBP12.64□□□□□ -0.39
KARS-204ENST00000564578 ZNF235Q14590 738 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 ANGPT1Q15389 498 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 CST6Q15828 149 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 ARSIQ5FYB1 569 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 HEATR6Q6AI08 1181 aaKnown RBP12.64□□□□□ -0.39
KARS-204ENST00000564578 ARRDC2Q8TBH0 407 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 OR8D1Q8WZ84 308 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 NELL1Q92832 810 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 TEKT5Q96M29 485 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 AGAP3Q96P47 875 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 HEPHQ9BQS7 1158 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 TMEM121Q9BTD3 319 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 AP1M1Q9BXS5 423 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 FBRSQ9HAH7 460 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 NOD2Q9HC29 1040 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 SEPT10Q9P0V9 454 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 IL36AQ9UHA7 158 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 AMACRQ9UHK6 382 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 FBXO4Q9UKT5 387 aa12.64□□□□□ -0.39
KARS-204ENST00000564578 PDE2AO00408 941 aaPredicted RBP12.63□□□□□ -0.39
KARS-204ENST00000564578 KRIT1O00522 736 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 ZBTB24O43167 697 aaPredicted RBP12.63□□□□□ -0.39
KARS-204ENST00000564578 MTSS1O43312 755 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 GALR2O43603 387 aaPredicted RBP12.63□□□□□ -0.39
KARS-204ENST00000564578 IL1BP01584 269 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 CD68P34810 354 aaPredicted RBP12.63□□□□□ -0.39
KARS-204ENST00000564578 HSPA9P38646 679 aaKnown RBP12.63□□□□□ -0.39
KARS-204ENST00000564578 RECQLP46063 649 aaPredicted RBP12.63□□□□□ -0.39
KARS-204ENST00000564578 NIPAL4Q0D2K0 466 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 SNX1Q13596 522 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 DRICH1Q6PGQ1 229 aaPredicted RBP12.63□□□□□ -0.39
KARS-204ENST00000564578 DARS2Q6PI48 645 aaKnown RBP12.63□□□□□ -0.39
KARS-204ENST00000564578 ZNF567Q8N184 647 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 TMIEQ8NEW7 156 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 PIP4K2CQ8TBX8 421 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 GRIN3AQ8TCU5 1115 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 SIPA1Q96FS4 1042 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 CCDC114Q96M63 670 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 FRMD8P1Q9BZ68 369 aaPredicted RBP12.63□□□□□ -0.39
KARS-204ENST00000564578 CPEB1Q9BZB8 566 aaKnown RBP12.63□□□□□ -0.39
KARS-204ENST00000564578 TPSD1Q9BZJ3 242 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 SERGEFQ9UGK8 458 aa12.63□□□□□ -0.39
KARS-204ENST00000564578 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
KARS-204ENST00000564578 CCDC163A0A0D9SF12 145 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 MID1O15344 667 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 KCNN4O15554 427 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 ALDH1A2O94788 518 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 IGSF6O95976 241 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 MMP2P08253 660 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 SLC8A1P32418 973 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 DRD3P35462 400 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 NUBP1P53384 320 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 DSC2Q02487 901 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 KCTD19Q17RG1 926 aaPredicted RBP12.62□□□□□ -0.39
KARS-204ENST00000564578 POM121L1PQ3SYA9 428 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 ZNF776Q68DI1 518 aaPredicted RBP12.62□□□□□ -0.39
KARS-204ENST00000564578 NCEH1Q6PIU2 408 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 SRLQ86TD4 932 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 CDKL3Q8IVW4 592 aaPredicted RBP12.62□□□□□ -0.39
KARS-204ENST00000564578 RYBPQ8N488 228 aaPredicted RBP12.62□□□□□ -0.39
KARS-204ENST00000564578 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.62□□□□□ -0.39
KARS-204ENST00000564578 AADATQ8N5Z0 425 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 FRMD1Q8N878 549 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms