RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ADCY5O95622 1261 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 TSHRP16473 764 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 GKP32189 559 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 CCKBRP32239 447 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 RABIFP47224 123 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 NEK3P51956 506 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 ADKP55263 362 aaKnown RBP10.56□□□□□ -0.72
SF3B3-204ENST00000563739 YWHAEP62258 255 aaKnown RBP10.56□□□□□ -0.72
SF3B3-204ENST00000563739 CCL7P80098 99 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 ARF5P84085 180 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 ZFP36L1Q07352 338 aaKnown RBP10.56□□□□□ -0.72
SF3B3-204ENST00000563739 PDCLQ13371 301 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 UBAP2LQ14157 1087 aaKnown RBP10.56□□□□□ -0.72
SF3B3-204ENST00000563739 STILQ15468 1287 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 MEA1Q16626 185 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 SKIDA1Q1XH10 827 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 PRRT3Q5FWE3 981 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 RABGAP1LQ5R372 815 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 ANKRD40Q6AI12 368 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 KIAA1161Q6NSJ0 714 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 OLFML1Q6UWY5 402 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 XKR5Q6UX68 686 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 KRBA2Q6ZNG9 492 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 USP53Q70EK8 1073 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 RRAGAQ7L523 313 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 RAB11FIP2Q7L804 512 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 SLITRK4Q8IW52 837 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 SDR16C5Q8N3Y7 309 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 TP53I13Q8NBR0 393 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-204ENST00000563739 TPCN2Q8NHX9 752 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 PCDH19Q8TAB3 1148 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 FAM174AQ8TBP5 190 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 STK32AQ8WU08 396 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 CENPTQ96BT3 561 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 CPXM1Q96SM3 734 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 SLC12A9Q9BXP2 914 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 MBNL1Q9NR56 388 aaKnown RBP10.56□□□□□ -0.72
SF3B3-204ENST00000563739 PIGVQ9NUD9 493 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 DDIT4Q9NX09 232 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 KCNK4Q9NYG8 393 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 IL36AQ9UHA7 158 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 USP25Q9UHP3 1055 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 PADI4Q9UM07 663 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 NEU3Q9UQ49 428 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 MAN2B2Q9Y2E5 1009 aa10.56□□□□□ -0.72
SF3B3-204ENST00000563739 IGLV3-10A0A075B6K4 115 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 SYNJ2BP-COX16A0A087WUM0 186 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 BECN2A8MW95 431 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 AREL1O15033 823 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 CETN3O15182 167 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 NVLO15381 856 aaKnown RBP10.55□□□□□ -0.72
SF3B3-204ENST00000563739 SART1O43290 800 aaKnown RBP10.55□□□□□ -0.72
SF3B3-204ENST00000563739 CLDN11O75508 207 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 GRAP2O75791 330 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 ENDOD1O94919 500 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 PRNPP04156 253 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 ZNF18P17022 549 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 ITIH2P19823 946 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 L1CAMP32004 1257 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 CCNHP51946 323 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-204ENST00000563739 CDH4P55283 916 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 YWHAZP63104 245 aaKnown RBP10.55□□□□□ -0.72
SF3B3-204ENST00000563739 RPS21P63220 83 aaKnown RBP10.55□□□□□ -0.72
SF3B3-204ENST00000563739 GCNT1Q02742 428 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 SPIDRQ14159 915 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 BECN1Q14457 450 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 IGFBP7Q16270 282 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 COBLL1Q53SF7 1204 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 TRNP1Q6NT89 227 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 PPM1KQ8N3J5 372 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 FBXO39Q8N4B4 442 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 ATP11CQ8NB49 1132 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 DENND6BQ8NEG7 585 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 ASB12Q8WXK4 309 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 NAT6Q93015 286 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 NT5C1BQ96P26 610 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 THAP9Q9H5L6 903 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 FAM204AQ9H8W3 233 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 METTL14Q9HCE5 456 aaKnown RBP10.55□□□□□ -0.72
SF3B3-204ENST00000563739 ST7Q9NRC1 585 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 GEMIN8Q9NWZ8 242 aaKnown RBP10.55□□□□□ -0.72
SF3B3-204ENST00000563739 ARHGEF38Q9NXL2 777 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 COX16Q9P0S2 106 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 PISDQ9UG56 409 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 SRPK3Q9UPE1 567 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 ZDHHC9Q9Y397 364 aa10.55□□□□□ -0.72
SF3B3-204ENST00000563739 ZNF106Q9H2Y7 1883 aaKnown RBP10.55□□□□□ -0.72
SF3B3-204ENST00000563739 DRGXA6NNA5 263 aa10.54□□□□□ -0.72
SF3B3-204ENST00000563739 H3BM21 787 aa10.54□□□□□ -0.72
SF3B3-204ENST00000563739 GJB6O95452 261 aa10.54□□□□□ -0.72
SF3B3-204ENST00000563739 NTRK1P04629 796 aa10.54□□□□□ -0.72
SF3B3-204ENST00000563739 RPLP0P05388 317 aaKnown RBP10.54□□□□□ -0.72
SF3B3-204ENST00000563739 RHOCP08134 193 aa10.54□□□□□ -0.72
SF3B3-204ENST00000563739 CCR1P32246 355 aa10.54□□□□□ -0.72
SF3B3-204ENST00000563739 SERPINH1P50454 418 aaKnown RBP10.54□□□□□ -0.72
SF3B3-204ENST00000563739 CLCN6P51797 869 aa10.54□□□□□ -0.72
SF3B3-204ENST00000563739 OXCT1P55809 520 aa10.54□□□□□ -0.72
SF3B3-204ENST00000563739 C16orf72Q14CZ0 275 aa10.54□□□□□ -0.72
SF3B3-204ENST00000563739 TCEA2Q15560 299 aa10.54□□□□□ -0.72
SF3B3-204ENST00000563739 ALG11Q2TAA5 492 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms