RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 GALNT15Q8N3T1 639 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 OR4N2Q8NGD1 307 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 POF1BQ8WVV4 589 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 IGSF21Q96ID5 467 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 ZNF700Q9H0M5 742 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 WDR6Q9NNW5 1121 aaKnown RBP3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 HDAC6Q9UBN7 1215 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 FBXO40Q9UH90 709 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 SRP68Q9UHB9 627 aaKnown RBP3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 A0A096LPK6 155 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 DYTNA2CJ06 578 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 FAM157AC9JC47 383 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 F5H423 210 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 IPO5O00410 1097 aaKnown RBP3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 LINC01565O15544 149 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 SEPT4O43236 478 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 PLGP00747 810 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 CST5P28325 142 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 GJC1P36383 396 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 GPR12P47775 334 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 DLX5P56178 289 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 ME3Q16798 604 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 KRTAP27-1Q3LI81 207 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 WBP2NLQ6ICG8 309 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 TYW3Q6IPR3 259 aaKnown RBP3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 JMJD6Q6NYC1 403 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 PATL1Q86TB9 770 aaKnown RBP3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 MYLK4Q86YV6 388 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 CCDC146Q8IYE0 955 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 SETD9Q8NE22 299 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 LINS1Q8NG48 757 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 RASSF8Q8NHQ8 419 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 TBC1D22AQ8WUA7 517 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 ADGRG7Q96K78 797 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 DUX5Q96PT3 197 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 PKP4Q99569 1192 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 CTDSP1Q9GZU7 261 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 GAREM1Q9H706 876 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 MVB12BQ9H7P6 319 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 PLCB1Q9NQ66 1216 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 SLC45A1Q9Y2W3 748 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 DAAM1Q9Y4D1 1078 aa3.48□□□□□ -1.85
HMGB1P33-201ENST00000563485 A0A1B0GVM2 712 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 CHL1O00533 1208 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 TIMM23O14925 209 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 BUB3O43684 328 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 KIF1CO43896 1103 aaKnown RBP3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 GAS8-AS1O95177 125 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 IL1AP01583 271 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 VEGFAP15692 232 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 CD72P21854 359 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 ADORA2A-AS1P86434 159 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 POU5F1BQ06416 359 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 MYBPHQ13203 477 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 CUL4BQ13620 913 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 SF3B4Q15427 424 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 RPE65Q16518 533 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 KRTAP24-1Q3LI83 254 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 SH2D4BQ5SQS7 431 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 VPS37AQ8NEZ2 397 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 NCSTNQ92542 709 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 ATP8A2Q9NTI2 1148 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 TMEM51Q9NW97 253 aa3.47□□□□□ -1.85
HMGB1P33-201ENST00000563485 WDR81Q562E7 1941 aa3.46□□□□□ -1.85
HMGB1P33-201ENST00000563485 A0A0U1RQJ8 604 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 SLC25A17O43808 307 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 HBP1O60381 514 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 ADAP00813 363 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 AFPP02771 609 aaKnown RBP3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 DAOP14920 347 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 CTPS1P17812 591 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 MCM2P49736 904 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 CYP4A11Q02928 519 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 POU3F1Q03052 451 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 SLC18A2Q05940 514 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 FAM27E3Q08E93 113 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 SNTA1Q13424 505 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 CAPSQ13938 189 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 TRIM14Q14142 442 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 TUBB8Q3ZCM7 444 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 FBXO43Q4G163 708 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 FAM83BQ5T0W9 1011 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 NCAPH2Q6IBW4 605 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 NAPEPLDQ6IQ20 393 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 GJB7Q6PEY0 223 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 GSG1LQ6UXU4 331 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 TMPRSS12Q86WS5 348 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 ZNF114Q8NC26 417 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 RUBCNQ92622 972 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 RNFT2Q96EX2 444 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 RBM17Q96I25 401 aaKnown RBP3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 INPP4AQ96PE3 977 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 CHODLQ9H9P2 273 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 MALT1Q9UDY8 824 aa3.46□□□□□ -1.86
HMGB1P33-201ENST00000563485 IGLV5-37A0A075B6J1 123 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 J3KR12 359 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 KRT36O76013 467 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 CH25HO95992 272 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 UMODP07911 640 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 RPL3P39023 403 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms