RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 METTL5Q9NRN9 209 aaKnown RBP17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 TMEM51Q9NW97 253 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 HECAQ9UBI9 543 aaPredicted RBP17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 NEU3Q9UQ49 428 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 ITM2BQ9Y287 266 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 ATMQ13315 3056 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 COL27A1Q8IZC6 1860 aaPredicted RBP17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 FAM72CH0Y354 149 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 TK2O00142 265 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 CSO75390 466 aaKnown RBP17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 ZIC2O95409 532 aaPredicted RBP17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 GP1BAP07359 652 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 UCHL3P15374 230 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 HNRNPKP61978 463 aaKnown RBP eCLIP17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 C15orf59Q2T9L4 293 aaPredicted RBP17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 FAM72AQ5TYM5 149 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 FAM72DQ6L9T8 149 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 LEKR1Q6ZMV7 388 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 ARCQ7LC44 396 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 PHLDB2Q86SQ0 1253 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 FAM72BQ86X60 149 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 FAM114A1Q8IWE2 563 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 IFI44Q8TCB0 444 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 SLC20A1Q8WUM9 679 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 NAF1Q96HR8 494 aaKnown RBP17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 LENG8Q96PV6 779 aaPredicted RBP17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 DEPDC7Q96QD5 511 aa17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 PNMA8BQ9ULN7 279 aaPredicted RBP17.09■□□□□ 0.33
HDGFL3-203ENST00000563404 A0A1W2PNU3 283 aaPredicted RBP17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 NEMP2A6NFY4 417 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 C16orf96A6NNT2 1141 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 F8VZ95 297 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 USP12O75317 370 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 GJB6O95452 261 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 TGM2P21980 687 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 ADRA1BP35368 520 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 RABIFP47224 123 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 CXADRP78310 365 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 GABREP78334 506 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 NRG1Q02297 640 aaPredicted RBP17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 C19orf57Q0VDD7 668 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 EIF2B5Q13144 721 aaKnown RBP17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 PDE1CQ14123 709 aaPredicted RBP17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 CCDC14Q49A88 953 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 GPR155Q7Z3F1 870 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 PARGQ86W56 976 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 PLPP6Q8IY26 295 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 JOSD2Q8TAC2 188 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 RXFP2Q8WXD0 754 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 ARHGEF2Q92974 986 aaKnown RBP17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 ISG20Q96AZ6 181 aaKnown RBP17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 ZNF578Q96N58 590 aaPredicted RBP17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 DUSP23Q9BVJ7 150 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 STK33Q9BYT3 514 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 TCEAL2Q9H3H9 227 aaPredicted RBP17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 USP29Q9HBJ7 922 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 SAMSN1Q9NSI8 373 aaKnown RBP17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 OR12D3Q9UGF7 316 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 DNAI1Q9UI46 699 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 NOCTQ9UK39 431 aaKnown RBP17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 CHD5Q8TDI0 1954 aa17.08■□□□□ 0.32
HDGFL3-203ENST00000563404 FPGTO14772 594 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 CASC3O15234 703 aaKnown RBP17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 LZTS3O60299 673 aaPredicted RBP17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 DXOO77932 396 aaKnown RBP17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 CHRNB2P17787 502 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 LSSP48449 732 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 PFN3P60673 137 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 CDKN3Q16667 212 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 CDO1Q16878 200 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 GUSBP11Q6P575 273 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 ZNF248Q8NDW4 579 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 MAPK15Q8TD08 544 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 LGMNQ99538 433 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 GANQ9H2C0 597 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 CLSTN2Q9H4D0 955 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 ASCL3Q9NQ33 180 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 CSNK1G3Q9Y6M4 447 aa17.07■□□□□ 0.32
HDGFL3-203ENST00000563404 CXorf51AA0A1B0GTR3 108 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 TEX51A0A1B0GUA7 166 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 AQP9O43315 295 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 TSPAN6O43657 245 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 CYP1A1P04798 512 aaPredicted RBP17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 UGT2B4P06133 528 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 RHOQP17081 205 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 JUNDP17535 347 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 MMP8P22894 467 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 ERCC5P28715 1186 aaPredicted RBP17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 KLK7P49862 253 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 DUSP3P51452 185 aaPredicted RBP17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 PCBP4P57723 403 aaKnown RBP17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 FMO1Q01740 532 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 SGCGQ13326 291 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 DEFB133Q30KQ1 61 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 ZNF805Q5CZA5 627 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 LRRC73Q5JTD7 316 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 ATXN7L2Q5T6C5 722 aaPredicted RBP17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 RWDD4Q6NW29 188 aaKnown RBP17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 ZCCHC8Q6NZY4 707 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms