RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PCED1AQ9H1Q7 454 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 EBF2Q9HAK2 575 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 VPS45Q9NRW7 570 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 UBA2Q9UBT2 640 aaPredicted RBP8.68□□□□□ -1.02
UBR1-204ENST00000563239 NCKAP1Q9Y2A7 1128 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.68□□□□□ -1.02
UBR1-204ENST00000563239 ADGRG1Q9Y653 693 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.68□□□□□ -1.02
UBR1-204ENST00000563239 ATXN2Q99700 1313 aaKnown RBP8.68□□□□□ -1.02
UBR1-204ENST00000563239 CEP192Q8TEP8 1941 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 DNAH14Q0VDD8 3507 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 LRRD1A4D1F6 860 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 GRID2IPA4D2P6 1211 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 GOLGA6L3A6NEY3 463 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 C1QTNF3-AMACRE9PGA6 284 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 KPNA3O00505 521 aaPredicted RBP8.67□□□□□ -1.02
UBR1-204ENST00000563239 SLC7A4O43246 635 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 SPINT1O43278 529 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 PSTPIP1O43586 416 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 PLRG1O43660 514 aaKnown RBP8.67□□□□□ -1.02
UBR1-204ENST00000563239 SPOPO43791 374 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 MAP3K6O95382 1288 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 POP4O95707 220 aaKnown RBP8.67□□□□□ -1.02
UBR1-204ENST00000563239 PRNPP04156 253 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 KRT1P04264 644 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 TNNT1P13805 278 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 CDKN2BP42772 138 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 RECQLP46063 649 aaPredicted RBP8.67□□□□□ -1.02
UBR1-204ENST00000563239 RHOAP61586 193 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 SNRPD1P62314 119 aaKnown RBP8.67□□□□□ -1.02
UBR1-204ENST00000563239 PPP2CBP62714 309 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 PPP2CAP67775 309 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 CCZ1BP86790 482 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 CCZ1P86791 482 aaPredicted RBP8.67□□□□□ -1.02
UBR1-204ENST00000563239 ADCY2Q08462 1091 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 GALNT2Q10471 571 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 KIAA0895LQ68EN5 471 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 SLC9A4Q6AI14 798 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 NCEH1Q6PIU2 408 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 PRR23CQ6ZRP0 262 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 ERN2Q76MJ5 926 aaKnown RBP8.67□□□□□ -1.02
UBR1-204ENST00000563239 MAP7D3Q8IWC1 876 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 LRRC8AQ8IWT6 810 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 PGBD5Q8N414 524 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 TSEN2Q8NCE0 465 aaKnown RBP8.67□□□□□ -1.02
UBR1-204ENST00000563239 OR2T34Q8NGX1 318 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 LRRN4Q8WUT4 740 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 FOXJ1Q92949 421 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 EXOC2Q96KP1 924 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 CCDC114Q96M63 670 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 GDAP1L1Q96MZ0 367 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 ZNF599Q96NL3 588 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 OMDQ99983 421 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 HINFPQ9BQA5 517 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 ZDHHC6Q9H6R6 413 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 LUC7LQ9NQ29 371 aaKnown RBP8.67□□□□□ -1.02
UBR1-204ENST00000563239 FSCN3Q9NQT6 498 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 DDX56Q9NY93 547 aaKnown RBP8.67□□□□□ -1.02
UBR1-204ENST00000563239 DTLQ9NZJ0 730 aa8.67□□□□□ -1.02
UBR1-204ENST00000563239 EVLQ9UI08 416 aaPredicted RBP8.67□□□□□ -1.02
UBR1-204ENST00000563239 TTC24A2A3L6 582 aaPredicted RBP8.66□□□□□ -1.02
UBR1-204ENST00000563239 FAM47DPA6NHR8 397 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 KRIT1O00522 736 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 WNT9AO14904 365 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 LATO43561 262 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 GDF9O60383 454 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 PALMO75781 387 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 FSBPO95073 299 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 IPO7O95373 1038 aaKnown RBP8.66□□□□□ -1.02
UBR1-204ENST00000563239 IGSF6O95976 241 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 UGT2B4P06133 528 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 CR2P20023 1033 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 ITGB7P26010 798 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 SERPINB6P35237 376 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 HOXD12P35452 270 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 GARSP41250 739 aaKnown RBP8.66□□□□□ -1.02
UBR1-204ENST00000563239 ABL2P42684 1182 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 CSNK1DP48730 415 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 PEX5P50542 639 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 CCR5P51681 352 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 IRX4P78413 519 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 BNC1Q01954 994 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 NSUN2Q08J23 767 aaKnown RBP eCLIP8.66□□□□□ -1.02
UBR1-204ENST00000563239 SFSWAPQ12872 951 aaKnown RBP8.66□□□□□ -1.02
UBR1-204ENST00000563239 IHHQ14623 411 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 RFTN1Q14699 578 aaPredicted RBP8.66□□□□□ -1.02
UBR1-204ENST00000563239 LBRQ14739 615 aaKnown RBP8.66□□□□□ -1.02
UBR1-204ENST00000563239 ZNF805Q5CZA5 627 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 TMCO4Q5TGY1 634 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 SLC23A3Q6PIS1 610 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 NPNTQ6UXI9 565 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 GDPD4Q6W3E5 623 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 SPOCD1Q6ZMY3 1216 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 PARS2Q7L3T8 475 aaKnown RBP8.66□□□□□ -1.02
UBR1-204ENST00000563239 DAAM2Q86T65 1068 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 KIAA1328Q86T90 577 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 NT5DC3Q86UY8 548 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 KATNAL2Q8IYT4 538 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 RYBPQ8N488 228 aaPredicted RBP8.66□□□□□ -1.02
UBR1-204ENST00000563239 TEX26Q8N6G2 289 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms