RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 YKT6O15498 198 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 BNIP3LO60238 219 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 GRAP2O75791 330 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 CALB1P05937 261 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 MYF5P13349 255 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 PRLRP16471 622 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 ACADSBP45954 432 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 ARRB1P49407 418 aaPredicted RBP13.66□□□□□ -0.22
SPG7-207ENST00000563218 PDCLQ13371 301 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 TCEAL1Q15170 157 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 PROX2Q3B8N5 592 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 OTUD1Q5VV17 481 aaPredicted RBP13.66□□□□□ -0.22
SPG7-207ENST00000563218 MON1BQ7L1V2 547 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 BEND5Q7L4P6 421 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 C14orf80Q86SX3 495 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 PRPF39Q86UA1 669 aaKnown RBP13.66□□□□□ -0.22
SPG7-207ENST00000563218 ERICH1Q86X53 443 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 ATP6V0D2Q8N8Y2 350 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 MFSD2AQ8NA29 543 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 TPCN2Q8NHX9 752 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 OR8D1Q8WZ84 308 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 ERVMER34-1Q9H9K5 563 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 UCKL1Q9NWZ5 548 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 UVRAGQ9P2Y5 699 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 VANGL2Q9ULK5 521 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 SNX10Q9Y5X0 201 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 TENM4Q6N022 2769 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 NAV2Q8IVL1 2488 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 A0A1B0GVM2 712 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 GRID2IPA4D2P6 1211 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 TCAF2A6NFQ2 919 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 SART1O43290 800 aaKnown RBP13.65□□□□□ -0.22
SPG7-207ENST00000563218 ATMINO43313 823 aaPredicted RBP13.65□□□□□ -0.22
SPG7-207ENST00000563218 SIGLEC6O43699 453 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 PALMO75781 387 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 URI1O94763 535 aaPredicted RBP13.65□□□□□ -0.22
SPG7-207ENST00000563218 C1SP09871 688 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 MMP8P22894 467 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 HADHBP55084 474 aaKnown RBP13.65□□□□□ -0.22
SPG7-207ENST00000563218 YWHAZP63104 245 aaKnown RBP13.65□□□□□ -0.22
SPG7-207ENST00000563218 RTP5Q14D33 572 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 DLG2Q15700 870 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 ACCSLQ4AC99 568 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 PIP5KL1Q5T9C9 394 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 TMEM110Q86TL2 294 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 TRIM69Q86WT6 500 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 SYCE1Q8N0S2 351 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 SLC25A45Q8N413 288 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 WDTC1Q8N5D0 677 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 FCRL3Q96P31 734 aaPredicted RBP13.65□□□□□ -0.22
SPG7-207ENST00000563218 SLC2A13Q96QE2 648 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 UBL7Q96S82 380 aaPredicted RBP13.65□□□□□ -0.22
SPG7-207ENST00000563218 CPXM1Q96SM3 734 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 NUP85Q9BW27 656 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 ANLNQ9NQW6 1124 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 DDIT4Q9NX09 232 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 JRKLQ9Y4A0 524 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 PCDHB1Q9Y5F3 818 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 OR51B4Q9Y5P0 310 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 HS3ST4Q9Y661 456 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 SCINQ9Y6U3 715 aa13.65□□□□□ -0.22
SPG7-207ENST00000563218 I6L893 689 aaPredicted RBP13.64□□□□□ -0.23
SPG7-207ENST00000563218 ATP9BO43861 1147 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 SNAP91O60641 907 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 RNGTTO60942 597 aaKnown RBP13.64□□□□□ -0.23
SPG7-207ENST00000563218 MTA2O94776 668 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 CNTN5O94779 1100 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 MT-CO1P00395 513 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 GIMD1P0DJR0 217 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 CKMT2P17540 419 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 TFE3P19532 575 aaPredicted RBP13.64□□□□□ -0.23
SPG7-207ENST00000563218 GLDCP23378 1020 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 RRM1P23921 792 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 ACP1P24666 158 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 NNMTP40261 264 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 PLK1P53350 603 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 PTP4A2Q12974 167 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 SLC12A1Q13621 1099 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 AUHQ13825 339 aaKnown RBP13.64□□□□□ -0.23
SPG7-207ENST00000563218 SLC45A4Q5BKX6 768 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 PCSK4Q6UW60 755 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 KDM7AQ6ZMT4 941 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 FAM183BPQ6ZVS7 135 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 OXR1Q8N573 874 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 SH2D3CQ8N5H7 860 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 SNIP1Q8TAD8 396 aaKnown RBP13.64□□□□□ -0.23
SPG7-207ENST00000563218 ZNF564Q8TBZ8 553 aaPredicted RBP13.64□□□□□ -0.23
SPG7-207ENST00000563218 STK32AQ8WU08 396 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 SLC39A7Q92504 469 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 ARRDC3Q96B67 414 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 RPRD1AQ96P16 312 aaPredicted RBP13.64□□□□□ -0.23
SPG7-207ENST00000563218 PSMB7Q99436 277 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 FEM1AQ9BSK4 669 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 NRSN2Q9GZP1 204 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 SYNCQ9H7C4 482 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 MRPL47Q9HD33 250 aaKnown RBP13.64□□□□□ -0.23
SPG7-207ENST00000563218 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.64□□□□□ -0.236e-7■■■■□ 23.4
SPG7-207ENST00000563218 SLC25A13Q9UJS0 675 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 PPM1HQ9ULR3 514 aa13.64□□□□□ -0.23
SPG7-207ENST00000563218 SCN8AQ9UQD0 1980 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms