RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 MRE11P49959 708 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 KRT81Q14533 505 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 LPAL2Q16609 132 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 NCBP2-AS2Q69YL0 99 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 SLC36A4Q6YBV0 504 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 ARHGAP36Q6ZRI8 547 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 CACUL1Q86Y37 369 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 AADATQ8N5Z0 425 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 KCTD6Q8NC69 237 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 TMIEQ8NEW7 156 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 OR8D1Q8WZ84 308 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 RUBCNQ92622 972 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 TOE1Q96GM8 510 aaKnown RBP6.29□□□□□ -1.4
CNOT1-204ENST00000563130 PDLIM2Q96JY6 352 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 RNF157Q96PX1 679 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 CALN1Q9BXU9 219 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 TNKS2Q9H2K2 1166 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 PABPC3Q9H361 631 aaKnown RBP6.29□□□□□ -1.4
CNOT1-204ENST00000563130 PGPEP1Q9NXJ5 209 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 SERGEFQ9UGK8 458 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 FZD4Q9ULV1 537 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 ZFHX2Q9C0A1 2572 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-204ENST00000563130 GRID2IPA4D2P6 1211 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 MID1O15344 667 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 SPOPO43791 374 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 MAFKO60675 156 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 RHOBTB1O94844 696 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 TMCC1O94876 653 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 EPN2O95208 641 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 ZIC2O95409 532 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-204ENST00000563130 GSRP00390 522 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 RETP07949 1114 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 ACADMP11310 421 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 TIMP2P16035 220 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 CHRNA3P32297 505 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 ACSL1P33121 698 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 GJC1P36383 396 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 PTGER3P43115 390 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 CCNHP51946 323 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-204ENST00000563130 METAP1P53582 386 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 IL10RBQ08334 325 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 KIF5AQ12840 1032 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 CYTH1Q15438 398 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 ELF2Q15723 593 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 TTC31Q49AM3 519 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-204ENST00000563130 CARD16Q5EG05 197 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 RIF1Q5UIP0 2472 aaKnown RBP6.29□□□□□ -1.4
CNOT1-204ENST00000563130 PEAR1Q5VY43 1037 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-204ENST00000563130 SLC9A4Q6AI14 798 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 SPAG17Q6Q759 2223 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 LEKR1Q6ZMV7 388 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 ZNF662Q6ZS27 426 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 LPCAT2Q7L5N7 544 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 DSG4Q86SJ6 1040 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 LRRC49Q8IUZ0 686 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 SLC41A1Q8IVJ1 513 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 KATNAL2Q8IYT4 538 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 TXLNBQ8N3L3 684 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 PLD5Q8N7P1 536 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 NETO2Q8NC67 525 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 CHST14Q8NCH0 376 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 CADM4Q8NFZ8 388 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 OR2AP1Q8NGE2 309 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 PIP4K2CQ8TBX8 421 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 LRIG1Q96JA1 1093 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 CCDC114Q96M63 670 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 ZNF599Q96NL3 588 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 PCED1AQ9H1Q7 454 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 DDX56Q9NY93 547 aaKnown RBP6.29□□□□□ -1.4
CNOT1-204ENST00000563130 NYNRINQ9P2P1 1898 aaKnown RBP6.29□□□□□ -1.4
CNOT1-204ENST00000563130 IPO11Q9UI26 975 aaKnown RBP6.29□□□□□ -1.4
CNOT1-204ENST00000563130 RAB23Q9ULC3 237 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 PCDHGA5Q9Y5G8 931 aa6.29□□□□□ -1.4
CNOT1-204ENST00000563130 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 A0A1W2PP55 124 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 BCLAF3A2AJT9 711 aaKnown RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 LRRD1A4D1F6 860 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 MFSD11O43934 449 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 LRP3O75074 770 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 IL1BP01584 269 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 PRNPP04156 253 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 CTNNA1P35221 906 aaKnown RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 SOX11P35716 441 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 CDKN2BP42772 138 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 PSMD8P48556 350 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 MARCKSL1P49006 195 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 PEX5P50542 639 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 SNRPD1P62314 119 aaKnown RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 RPL6Q02878 288 aaKnown RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 ZNF33AQ06730 810 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 VAC14Q08AM6 782 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 GALNT2Q10471 571 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 SLC10A2Q12908 348 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 RFTN1Q14699 578 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-204ENST00000563130 FAM46CQ5VWP2 391 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 MFSD7Q6UXD7 560 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 DAAM2Q86T65 1068 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 KIAA1328Q86T90 577 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 TMEFF1Q8IYR6 380 aa6.28□□□□□ -1.4
CNOT1-204ENST00000563130 RNF10Q8N5U6 811 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms