RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 FAR1Q8WVX9 515 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 NCSTNQ92542 709 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 TBC1D20Q96BZ9 403 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 ZNF333Q96JL9 665 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 TEFMQ96QE5 360 aaKnown RBP3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 B3GNT4Q9C0J1 378 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 NOD2Q9HC29 1040 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 ZDHHC7Q9NXF8 308 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 UPB1Q9UBR1 384 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 FEM1BQ9UK73 627 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 DHDHQ9UQ10 334 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 RAP2CQ9Y3L5 183 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 INAFM1C9JVW0 142 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 DDAH2O95865 285 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 MYZAPP0CAP1 466 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 UNGP13051 313 aaPredicted RBP3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 ARSAP15289 507 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 RXRAP19793 462 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 AVPR2P30518 371 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 TNFSF8P32971 234 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 GJC1P36383 396 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 HALP42357 657 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 MVDP53602 400 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 DLX5P56178 289 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 EEF1A2Q05639 463 aaKnown RBP3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 KIF5AQ12840 1032 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 BYSLQ13895 437 aaKnown RBP3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 EFR3AQ14156 821 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 GPR18Q14330 331 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 ANKRD1Q15327 319 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 CCDC6Q16204 474 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 FBXO47Q5MNV8 452 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 DNTTIP2Q5QJE6 756 aaKnown RBP3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 DENND1BQ6P3S1 775 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 CTU1Q7Z7A3 348 aaKnown RBP3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 GPSM1Q86YR5 675 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 FAM217AQ8IXS0 508 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 SCAIQ8N9R8 606 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 LINS1Q8NG48 757 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 GABPB2Q8TAK5 448 aaPredicted RBP3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 BICD2Q8TD16 824 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 RILPL2Q969X0 211 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 EPYCQ99645 322 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 PYM1Q9BRP8 204 aaKnown RBP3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 HERC2P3Q9BVR0 1158 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 PPCSQ9HAB8 311 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 FBXO40Q9UH90 709 aa3.34□□□□□ -1.87
HDGFL3-202ENST00000562702 ZCCHC6Q5VYS8 1495 aaKnown RBP3.34□□□□□ -1.88
HDGFL3-202ENST00000562702 A0A1B0GVT2 93 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 C17orf102A2RUQ5 167 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 CLEC18AA5D8T8 446 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 PRR23AA6NEV1 266 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 B9A039 149 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 RNMTO43148 476 aaKnown RBP3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 ANP32CO43423 234 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 ZBTB11O95625 1053 aaPredicted RBP3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 IGLV2-11P01706 119 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 MMP3P08254 477 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 ARSBP15848 533 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 YWHAQP27348 245 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 ARHGAP8P85298 464 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 PPFIA1Q13136 1202 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 GPS2Q13227 327 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 SLC39A14Q15043 492 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 ZRSR1Q15695 479 aaKnown RBP3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 CBWD5Q5RIA9 395 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 LDHAL6AQ6ZMR3 332 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 SLC16A12Q6ZSM3 486 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 ARMC9Q7Z3E5 817 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 WDR5BQ86VZ2 330 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 ANKRD18AQ8IVF6 992 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 ZDHHC23Q8IYP9 409 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 CADM3Q8N126 398 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 MUC20Q8N307 709 aaPredicted RBP3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 USP38Q8NB14 1042 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 KDM1BQ8NB78 822 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 CLEC18CQ8NCF0 446 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 SH3KBP1Q96B97 665 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 MASTLQ96GX5 879 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 WDR77Q9BQA1 342 aaPredicted RBP3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 CATSPERBQ9H7T0 1116 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 ITM2CQ9NQX7 267 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 CDH22Q9UJ99 828 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 DNAJC16Q9Y2G8 782 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 GDAQ9Y2T3 454 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 PCDHGB3Q9Y5G1 929 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 MST1RQ04912 1400 aa3.33□□□□□ -1.88
HDGFL3-202ENST00000562702 OR6C68A6NDL8 312 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 STMND1H3BQB6 276 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 RGS14O43566 566 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 BUB3O43684 328 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 PIP5K1CO60331 668 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 TSPAN3O60637 253 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 PPP1R3DO95685 299 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 CNPP09543 421 aaKnown RBP3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 CHRNB2P17787 502 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 AVPR1AP37288 418 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 MTNR1AP48039 350 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 ACSM2AQ08AH3 577 aa3.32□□□□□ -1.88
HDGFL3-202ENST00000562702 IL13RA2Q14627 380 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms